Yersinia enterocolitica WA: CH47_1315
Help
Entry
CH47_1315 CDS
T03643
Symbol
kdgM
Name
(GenBank) oligogalacturonate-specific porin kdgM
KO
K22110
oligogalacturonate-specific porin family protein
Organism
yew
Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yew02000
]
CH47_1315 (kdgM)
Transporters [BR:
yew02000
]
Other transporters
Pores ion channels [TC:
1
]
CH47_1315 (kdgM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdgM
LamB
OMP_b-brl
DUF481
Porin_4
PFU
Phe_ZIP
Motif
Other DBs
NCBI-ProteinID:
AJI85014
LinkDB
All DBs
Position
complement(1368435..1369133)
Genome browser
AA seq
232 aa
AA seq
DB search
MKFKLLTLAVASVISFSSVATTIDYRHEMKDTSKSDHKDRLLISNRFANGFGLSLEGKWG
QHSSDTTPNKPFNEQVSNGTEVVASYVYQFNKTFQLEPGFSLESSSDSNNYRPYLRGKVS
FTDDFSTSLRYRPYYKRNQPAQTKATEKGHEFTMLFAYNFLKNYSAEYELNYKKSEDEIL
ANKEKEEWSHDVKVAYKWDKNWKPYVAIGNVAGSKTTDERQTRYRVGVQYSF
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaaattactgactctggcagtggcatctgtaatcagctttagttctgttgca
acaacaattgactaccggcacgaaatgaaagatacaagtaaatctgatcacaaagatcgt
ttactgatttccaaccgttttgctaatggctttggtttgtcattagaaggtaaatggggc
cagcacagctctgataccacaccaaataaacctttcaatgaacaagtgagtaatggcacc
gaagtcgttgccagttatgtttatcagttcaataaaacattccagttggagcctggtttc
tcattagagtcttcttctgattctaataactaccgcccttacctgcgcggtaaagtgtca
tttactgatgacttctcaacatcactgcgttatcgcccatattacaagcgtaaccagccg
gctcagactaaagcaacagagaaaggccacgagttcactatgttgtttgcctacaacttc
ttgaaaaactattcagcagaatatgaattgaactacaagaaatccgaagacgaaattctg
gccaataaagagaaagaagagtggagtcatgatgtgaaagtcgcatacaaatgggataaa
aactggaagccatatgttgccatcggcaacgttgctggcagcaaaaccacagatgagcgt
caaactcgttaccgtgttggtgtgcagtacagcttctaa
DBGET
integrated database retrieval system
