Yersinia enterocolitica WA: CH47_1960
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Entry
CH47_1960 CDS
T03643
Name
(GenBank) ABC transporter family protein
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
yew
Yersinia enterocolitica WA
Pathway
yew02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CH47_1960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yew02000
]
CH47_1960
Transporters [BR:
yew02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CH47_1960
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
Zeta_toxin
AAA_21
DUF6879
AAA_22
SRP54
AAA_16
nSTAND3
AAA_30
AAA_25
ABC_ATPase
RsgA_GTPase
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AJI82596
UniProt:
Q9X9I6
LinkDB
All DBs
Position
complement(2065588..2067390)
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AA seq
600 aa
AA seq
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MKDNNPADNLAWRVIWRQLISSVGSQARMLRRSMLALLLAAFMQGIAFACLYPIIDALLR
GDAPQLLNWAVAFSVAAIVTLALRWYGLGFEYRGHLAQATHELRLRLGEQLRRVPLEKIQ
RGRAGEMNALLLGCVDENLNYVIAIANILLLTIVTPLTASLATLWIDWRLGLVMLLIFPL
LVPFYYWRRPAMRRQMQTLGEAHQRLSGDIVEFAQGMMVLRTCGSDADKSRALLAHFNTL
ENLQTRTHRQGAGATMLIASVVELGLQVVVLSGIVWVVTGTLNLAFLIAAVAMIMRFAEP
MAMFISYTSVVELIASALQRIEQFMAIAPLPVAAQSEMPERYDIRFDNVSYRYEEGDGHA
LNHVSLTFPAASMSALVGASGAGKTTVTKLLMRYADPQQGQISIGGVDIRRLTPEQLNSL
ISVVFQDVWLFDDTLLANIRIARPQATRQEVEEAARAAQCLEFISRLPQGWLTPMGEMGG
QLSGGERQRISIARALLKNAPVVILDEPTAALDIESELAVQKAIDNLVHNRTVIIIAHRL
STIAGAGNILVMEEGQVVEQGTHAQLLSHHGRYQALWQAQMAARVWRDDGVSASGEWVHE
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacaataatcctgcggataacctggcctggcgcgtcatctggcgccagcttatc
tccagcgttggcagtcaggccaggatgctgcggcgcagtatgctggcgctgttgctggcg
gcattcatgcaggggatcgcctttgcctgtctttatccgatcattgatgcgctgttacgg
ggagacgcgccgcaacttctcaactgggctgtggccttcagcgtcgccgcgattgtgacg
ctggcgctacgctggtatggcttgggctttgaataccgtggtcatctggcgcaggccacc
catgagttgcgcctgcgacttggcgagcagttacgccgcgtgccgctggagaagatccag
cgtggcagggcgggcgaaatgaacgccttgctgctgggctgcgtggatgaaaaccttaat
tatgttattgcgatagccaatattttgctgctcaccattgtcacgccgctgacggcgtcg
ctggcgacattgtggatagactggcggctggggctggtgatgttgctgatcttccctctg
ctggtgccgttttattactggcgccgcccggcgatgcggcgacaaatgcagacgctgggg
gaagcgcaccagcgtctgagcggcgatatcgttgaatttgctcaggggatgatggtattg
cgcacctgcggcagcgatgccgataaaagccgggcgctgctggcgcatttcaatacgctg
gaaaacttacagacccgcactcaccgtcagggcgctggcgcgacgatgctgatcgccagc
gtcgtggagttgggcctacaggtggtggtgttatccgggatcgtctgggtggtgacgggc
actctgaacctcgcctttttgattgccgccgtcgcgatgattatgcgcttcgcagaaccg
atggcgatgtttatcagctacacctcggttgtggaactgatcgccagcgccctgcaacgg
attgagcagtttatggcgatagcaccgcttcccgtcgcagcgcaaagcgagatgccggaa
cgttacgatatccgctttgacaacgtcagctatcgctacgaagaaggcgacggccacgcg
cttaatcatgtttctttgacgttcccggcggccagtatgagcgcgctggtgggcgcctcc
ggcgcaggcaaaaccacggtcactaaactgttaatgcgctatgccgatccgcagcaaggg
cagatttctattggcggcgtcgatattcgccgcctgacgccggaacagctcaatagcctg
atttctgttgttttccaggatgtctggctgtttgatgacacgctgctggcgaatatccgt
atcgcgcgcccacaggcgacgcgacaggaggtggaagaggcagcccgcgcggcgcagtgc
cttgagtttatttcccgtcttccgcaaggctggctgacgccaatgggggagatgggcggc
cagctatcgggcggcgagcgccagcggatttccattgccagagcgttattgaaaaacgcg
ccggtcgtcattctcgatgaaccgaccgccgcgctggatattgaaagcgagctggcggtg
caaaaagcgatcgataacctggtccacaaccggacggtgattatcatcgctcaccgttta
tccaccatcgccggggccggaaacatcctggtgatggaagagggacaggtggttgagcag
ggtactcatgcgcaattgctctctcatcatggacgttatcaggcgctgtggcaggcgcaa
atggccgcgcgcgtgtggcgcgacgacggggtttccgcgtctggagagtgggtgcatgag
tga
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