Yersinia enterocolitica WA: CH47_230
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Entry
CH47_230 CDS
T03643
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
yew
Yersinia enterocolitica WA
Pathway
yew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CH47_230 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yew03400
]
CH47_230 (recC)
Enzymes [BR:
yew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CH47_230 (recC)
DNA repair and recombination proteins [BR:
yew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CH47_230 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
TTc_toxin_rep
Motif
Other DBs
NCBI-ProteinID:
AJI81984
LinkDB
All DBs
Position
238208..241579
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AA seq
1123 aa
AA seq
DB search
MFTVYHSNQLDLLKALTTALIEREPLDNPFQQEVVLVQSPGMAQWLQMQLAQQFSIAANI
EFPLPATFIWEMFTRVLPGIPKESAFSKDAMTWKLMWLLPDLLENPVFSAMKRYLSDDSD
KRKIHQLAARVADLFDQYLVYRPEWLESWERGQLIDNLDDAQQWQALLWVELTRYTRQLE
QPEWHRANLYQRFIRTLLESDVCPTGLPKRVFICGISALPPIYLQALQALGKHIDIHLMF
TNPCRYFWGDIQDYAFLAKLQSRKRRHYRESVEVKLFRDPEQAEQLFNADGEQDLSNPLL
ASWGRLGRDHMYLLSQVDEIQEVHAFVDIEPDNLLHGIQHDMLELEDHAIIGTTPETLAH
SHQKRVLDLRDRSLSMHVCHSPQREVEVLQDNLLRLLEADPELTPRDIIVMVADIDSYTP
YIQATFGNATGDRYLPFAISDRKASQAHPALQAFISLLDLPQSRFTSEQVLALLEVPVLA
NKFGITEDGLRRLRQWVDESGIRWGLDDDNVRELSLPATGQHTWHFGLTRMLLGYAMDSN
AGDWQGVLPYDESSGLAAELAGQLADMLMQLSQWRQQLSESRSLSEWLPLCRQLLDTFFE
PDNDTEAVLVLIEQQWQKVISYGIAAQYPDIVPLNLLRDELASRLDNERISQRFLAGPIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMAKQVRRGDRSRRDDDRYLFLEAL
LSAQQQLYISYIGRSIQDNSKRYPSVLVSELIEYISQSYHLPGDEELSADDSAKRVIQHL
LCWHARMPFAAENFTQNSELQSYAAEWLPAAESRGAAHPEFNQPLPPEPLPEITLDELIR
FYRHPVRAFFQLRLGVNFVIEETELPDEEPFTLDNLNRYQFNTQLLNALIEESDINTVFT
RARAAGNLPYGSFGELYWESQQEEMLPLAEQICVERKESHSIELNIEFGDTTLTGWMHQI
QEDGLVRWRPAALTAVDGLLLWIEHLVYCAAGGEGESRMYGRKGTAWRYAPLDCNEARQY
LQQLISGYQQGMCEPLLLLSKSGWAWLSQCFDRESGQILWDEEIQTKARMKLLQVWQGDQ
RIAGEGEDNYIQRVFSLMDNQHLDTILHETERYLLPIARHNKA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggtttatcattctaatcaattggatttactcaaagcgctaaccactgcgctg
atagaacgagaaccgttggataacccttttcagcaagaagtggtactggtgcaaagccca
ggtatggcccaatggctacaaatgcaattggctcaacaatttagtattgcagctaatatt
gaatttccattgcctgcgacctttatctgggaaatgtttacccgcgtgttacccggcatc
ccaaaagaaagcgcatttagcaaagatgccatgacatggaaactcatgtggttattgcct
gacctattggagaatccggtattttctgcgatgaaacgctatttaagtgatgatagcgat
aaacgtaaaattcaccaacttgcggcacgcgtcgctgacctttttgaccaatatctggtg
taccgcccagaatggcttgagagttgggaacgtggtcaactcattgataatttggatgat
gcccagcagtggcaagctttactgtgggttgaattaacgcgctatacccgccaattagaa
caaccggaatggcaccgcgccaatctctatcagcgttttattcgcacacttctcgaatcc
gatgtttgtccgacagggctacccaaacgagtattcatctgtggcatatccgctttaccc
ccaatctatttacaggccttacaagcactgggtaaacacatcgatattcatttgatgttt
actaacccgtgccgttatttctggggagacattcaggattatgcttttctggccaagctg
caaagccgtaaacgcagacattatcgtgagtcggtggaagtaaaactgttccgtgaccct
gagcaggcggagcaactatttaatgctgatggtgaacaagatcttagtaacccgttatta
gcctcatgggggcgacttggtcgtgaccacatgtatctgttatcccaagttgatgagatc
caagaggttcatgcttttgtggatatcgaacctgataacctattacatggtattcaacac
gatatgctagagcttgaagatcacgccattattggtactacgccagagacattagcgcat
agccaccaaaaacgagtattagatctcagggatcgctccctaagcatgcacgtctgccac
agccctcagcgcgaagttgaagttttacaagataatctgctgcgattattagaggctgac
cccgaactgactccgcgtgacattattgtcatggtcgctgacattgatagctataccccc
tatattcaggccacatttggtaatgctacaggggatcgctatttgccatttgcgatttca
gaccgcaaggctagccaggcacatcctgcacttcaggcttttatctctctacttgatttg
ccccagagccgttttacttctgagcaggtattagccctgctggaagtgcctgttttagcc
aataaatttggtattaccgaagatggattgcgccgtttacggcaatgggttgatgagtca
ggtatccgctggggattagatgatgacaatgtgcgcgagttgtctctgcccgcaaccggt
cagcatacctggcattttggcctgactagaatgctgctgggttatgctatggacagcaat
gccggtgactggcaaggggttttgccctatgacgaatccagcggtttagcggctgagctt
gccgggcaattagcggatatgttgatgcaattgagccagtggcgacagcaattaagcgaa
tctcgttcactcagtgaatggctaccattatgccgtcaattattagataccttctttgaa
cccgataatgatactgaagcggtgctggttctgattgagcagcaatggcagaaggttatc
agctatggtattgctgcccaatatcctgatattgtgccgctgaatctgttacgggatgaa
ctggcttcgcgtctggacaatgaacgtattagccagcgcttcctcgcagggccaatcaat
ttctgtacactgatgccgatgcgttcaatcccgtttaaagtggtgtgcttattaggaatg
aatgacggtgtttacccacgaacactaccaccgctaggttttgatttgatggctaaacag
gttcggcgcggtgaccgtagccgccgtgatgacgaccgctatctgttcctcgaagcatta
ctctctgcccagcagcagctctatatcagttatatcgggcgctcgattcaagacaacagt
aagcgctatccttcagttctggttagtgagttgattgaatacatttcccaaagttatcac
ttgccaggtgatgaagaactcagtgctgatgatagtgccaagcgggtcattcaacattta
ctctgctggcatgcgcgtatgccgtttgcagcagagaattttacccaaaatagtgagtta
caaagctatgccgctgaatggttacctgctgctgagtccagaggcgcggcgcacccagaa
tttaatcagcctctgccgccagaacccttacctgaaatcactcttgatgaattaatccgc
ttctatcgccaccctgtgagggcttttttccaactccgattgggggtgaatttcgttatt
gaagaaacggaactacctgatgaagaaccctttactttggataacctcaaccgttatcag
tttaatactcaactattgaatgcattgatagaagaaagtgatatcaatactgtcttcacc
cgtgcccgtgcggcgggcaatcttccttatggttcttttggcgagctttactgggaaagt
cagcaagaagaaatgctgccattagctgaacaaatttgtgttgaacgcaaagagagccac
agtattgagctaaatattgagtttggcgataccaccctgactggatggatgcatcaaatt
caggaagatggcttagttcgctggaggccagcggcacttacggcggtcgatgggcttcta
ttatggattgaacatttggtgtattgcgccgcaggcggtgagggtgaaagccggatgtat
gggcgtaaaggaactgcatggcgttatgccccactggattgcaatgaagcacggcaatat
ttacagcagttaatcagtggctatcagcaaggtatgtgcgaacctttactactgctgagt
aaaagcggctgggcatggttgagtcagtgttttgatcgcgagtcggggcaaattttgtgg
gatgaagaaatacaaaccaaagcccgaatgaaacttttacaggtttggcaaggtgaccaa
cggattgccggagagggtgaggataactatatacaaagggtattcagcctgatggataac
caacatctcgacacgatattacatgaaactgaacgttatttattaccaatagctcgccat
aataaggcgtga
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