Yersinia enterocolitica WA: CH47_2318
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Entry
CH47_2318 CDS
T03643
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
yew
Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yew03400
]
CH47_2318 (phrB)
Enzymes [BR:
yew01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CH47_2318 (phrB)
DNA repair and recombination proteins [BR:
yew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CH47_2318 (phrB)
Prokaryotic type
CH47_2318 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CON_HrpB
Motif
Other DBs
NCBI-ProteinID:
AJI82734
LinkDB
All DBs
Position
complement(2470654..2472099)
Genome browser
AA seq
481 aa
AA seq
DB search
MATHLVWFRNDLRVTDNLALHTACQDPQATVIAVFIATPAQWAAHDMAPRQAAFLLQNLQ
LLQDALAARAIPLHYHQCDDFKDSITWLADFCQQQQVDALFYNHQYELNERMRDEALMTK
LSHRAIACHGFHDSVLLPPGSVLTGNNEMYKVFTPFRRAFIQRLMMSDCRSVPAPKARTT
AAVIPSQPLAPFDYPQQPVDSQLFPAGEEAALQRLRSFCREDVQDYQQQRDFPAVAGTSC
LSPYLALGILSPRQCVNRLRAECPQVLENADGGAFIWLNELIWREFYRHLLVAYPRLCQH
HPFIGWTDAVLWNHSKQQLIAWQQGRTGYPIVDAAMRQLNETGWMHNRLRMISASFLVKD
LLIDWRQGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDQDGVF
IRRWLPELAAVPDSDIHQPWRWAERQQQSLDYPPPLVEHKQARLATLAAFEAAKRDGSKD
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcatctggtctggtttcgtaatgacttacgcgtcactgacaacttggcattg
catacggcgtgtcaggacccacaagcgacagtgattgcggtgtttattgcgacccccgca
caatgggctgcgcatgatatggcaccgcggcaggccgcatttttgctgcaaaacctgcaa
ttgctacaggatgcactcgccgcgcgggcgatcccactgcactatcatcagtgtgatgat
tttaaggattcgattacctggttggctgatttttgtcagcaacagcaagtggatgcactg
ttttataaccatcagtatgagctgaatgagcggatgcgcgatgaggcattgatgacaaag
ctgagtcatcgtgcgattgcttgtcatggttttcatgacagtgtgttattgccgccgggc
agtgtcctgacgggtaataatgaaatgtataaagtgttcactccgtttcgccgtgctttt
atccagcgtttaatgatgagtgattgccgcagtgtcccagccccgaaagctcgtaccacc
gcagcggtgatcccctcacagcccctagctccgtttgattacccgcaacaaccggtagac
agccagctatttccggcgggtgaagaagcggcgttacagcgcttacgcagtttttgtcgc
gaagatgttcaggactatcaacagcaacgtgattttcctgctgtggcgggcaccagttgc
ctgtcaccttatcttgcgctgggaatactttcaccccgtcaatgtgttaatcgcctgcgt
gctgaatgtccacaggtgttggaaaatgccgatggcggggcttttatttggcttaatgaa
ttgatctggcgtgaattttatcgccatttattggtagcttatccacgattatgccagcat
catccctttattggttggactgatgcagtactatggaatcactccaaacagcaattaatc
gcctggcagcaagggcgaacaggttatcctattgtcgatgctgccatgcggcaactcaat
gaaaccggttggatgcataaccgcctgcgaatgatcagtgccagttttctggttaaagat
ttgctcatcgactggcgacaaggagaacgctattttatgtcgcaactgctggacggtgat
ttggctgcgaataatggtggctggcaatgggctgcttctaccgggacagatgccgcacct
tactttcgtatctttaaccccaccacccagggtgagcgttttgaccaagacggcgtgttt
attcgccgctggttgcctgaattggcggcagtaccagacagtgatatccatcagccgtgg
cgttgggccgagcggcaacagcaatcattggattacccaccaccgctggtggagcataag
caggccagattggcgacactcgcggcgtttgaagccgctaagcgggatggtagcaaggat
ccctaa
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integrated database retrieval system
