Yersinia enterocolitica WA: CH47_2643
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Entry
CH47_2643 CDS
T03643
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
yew
Yersinia enterocolitica WA
Pathway
yew02024
Quorum sensing
yew03060
Protein export
yew03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CH47_2643 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CH47_2643 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH47_2643 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
yew02044
]
CH47_2643 (ffh)
Enzymes [BR:
yew01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CH47_2643 (ffh)
Secretion system [BR:
yew02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CH47_2643 (ffh)
Eukaryotic Sec-SRP protein
CH47_2643 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_31
AAA_30
AAA_24
KTI12
AAA_33
APS_kinase
YqeC
VirC1
AAA_14
AAA_19
Fe-ADH_2
ABC_tran
TsaE
ArsA_ATPase
AAA_16
DUF5407
Motif
Other DBs
NCBI-ProteinID:
AJI83934
UniProt:
A0A0E8GCL0
LinkDB
All DBs
Position
complement(2832847..2834208)
Genome browser
AA seq
453 aa
AA seq
DB search
MFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKERAV
GHEVNKSLTPGQEFVKIVKNELIAAMGEVNNELNLAAQPPAVVLMAGLQGAGKTTSVAKL
GKFLKEKQKKKVLVVSADVYRPAAIKQLETLAQGVGIDFFPSDVQEKPIDIVNRALQQAK
LKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKSDALEPFHPDRVASRILGMGDV
LSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDFLDQLKQMRNMGGMASMLSKMPGAGQL
PDNVKSQMDDKVTVRMEAIINSMTLKERAKPEIIKGSRKRRIATGSGVQVQDVNRLLKQF
DEMQRMMKKMKNGGLAKMMRGMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacttaactgatcgattgtcgcgcacattgcgcaatatcagcggccgtggc
cggctgacagaagaaaatattaaagaaacgctacgtgaagtacgcatggcgttactggaa
gctgacgtagctctgccggttgttcgtgattttattaaccgggtaaaagagcgcgctgtc
gggcatgaggtaaataagagcctcacgccaggacaggaattcgtcaaaatcgttaagaat
gaacttattgccgcgatgggcgaggtcaataacgaactgaatctggcagcgcaaccgcca
gcagtggtgttaatggctggcttgcaaggtgcaggtaaaaccaccagtgtggctaaactg
ggtaagttccttaaagaaaaacagaagaaaaaagtgctggttgtttccgctgacgtttat
cgccctgcggcgatcaaacagttggaaaccctggctcagggtgttggcattgatttcttc
ccgtctgatgtacaggaaaaaccgattgatatcgtcaatcgtgctctacagcaggcgaag
cttaaattttatgatgttctgattgtcgataccgccggtcgcttgcacgtcgatgaagcg
atgatggacgaaatcaaacaagttcatgctgcgattaacccggttgaaactttgtttgtc
gtggatgccatgaccggtcaggatgcggccaatacagcgaaagcatttaacgaagcgctg
ccgctcactggtgtcgtgctgaccaaagttgatggtgatgcccgtggcggtgctgcgtta
tcgatccgtcatatcaccggtaagccgattaaattcctcggtgtcggtgaaaagtcagat
gcgcttgaacccttccatccagatcgcgtggcttcacgtattctggggatgggcgatgtc
ctgtcgctgattgaagatatcgaaagcaaagttgaccgcgcgcaagcggaaaaactggca
actaagctgaaaaaaggcgatggcttcgatctcaatgactttctggatcaactgaagcaa
atgcgcaatatgggcggtatggccagcatgttgagtaaaatgccgggtgcgggccagttg
ccagataacgtgaaatcgcagatggatgacaaggtgaccgtgcggatggaggcaatcatc
aactcgatgacgctgaaagaacgcgccaagccagaaatcatcaaaggttcacgtaagcgc
cgtattgccactggttctggtgtgcaagtgcaggatgttaaccgcttactcaagcagttc
gacgaaatgcagcgcatgatgaagaaaatgaaaaatggcggtctggccaaaatgatgcgt
ggcatgaaaggtatgatgccaccaggtttcccgggccgctaa
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