Yersinia enterocolitica WA: CH47_2717
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Entry
CH47_2717 CDS
T03643
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
yew
Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yew03016
]
CH47_2717 (truD)
Enzymes [BR:
yew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CH47_2717 (truD)
Transfer RNA biogenesis [BR:
yew03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CH47_2717 (truD)
Prokaryotic type
CH47_2717 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AJI83286
LinkDB
All DBs
Position
complement(2907606..2908655)
Genome browser
AA seq
349 aa
AA seq
DB search
MDMDNLTWLHGKPKASGVLKANPEDFVVVEDLGFEPDGEGEHLLVRIRKHGCNTQFVADY
LARFAKIHPRLVSYAGLKDRHAVTEQWFCLHLPGKEAPDLSTFELEGCEVLESVRQKRKL
RIGSLKGNAFTLVLRHITDNQDVEQRLQQIAAHGVPNYFGSQRFGRGGNNLVQARLWANN
EIRVKERSKRSFYLSASRSAMFNLISSDRLAQQQATTVLEGDALQLSGRGSWFVAAADEL
ALLQQRVDAGELNITAPLPGDGELGTQGAALAFEQACLADQTELLALIKRERVEGARRAI
LLKPQNMAWNWWDEVTLELSFWLPAGSFATSVVREIMNQDNADAADIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggatatggacaatctaacctggttgcacggcaagcccaaggcgagtggcgttttaaaa
gccaacccggaagattttgtggtagtggaagatctgggttttgagccggacggtgaaggc
gagcatttattggttcgtatccgcaaacatggctgtaacacccaatttgttgctgattat
ctggcgcgattcgccaaaattcacccacggctggtgagctatgcgggcttgaaagatcgt
cacgcagtcaccgagcagtggttttgtctgcacttgccgggcaaagaagcgccggatctt
tcgactttcgagctggaaggttgtgaagtgctggagtctgtgcggcagaaaagaaagtta
cgtatcggttcattgaaaggcaatgcttttaccttggtattgcgccacataacagacaat
caggacgtagaacaacgcttgcaacagatagccgcgcatggcgtacctaactattttggt
agccagcgatttggccgtggtggcaataatctggtgcaggctcgcttgtgggcgaataat
gaaattcgggtgaaagagcgcagtaaacgcagcttttacttatccgccagccgtagcgcc
atgttcaacctgattagcagtgaccgtttggctcaacagcaggcgacgacggtgctggaa
ggggatgcattacagctctcggggcgcggcagttggtttgttgccgcagctgatgagttg
gccttgttacagcagcgagtcgatgcgggcgaactgaatattacagcgccattgcccggt
gatggtgagctgggcactcaaggcgcagcattagctttcgagcaggcatgtttagcggat
caaaccgagttactggcgctgattaaacgcgaacgtgttgaaggggcacgccgggccatt
ttgctgaaaccgcagaatatggcatggaactggtgggatgaggtcacgttggaactcagc
ttctggttacccgccggtagttttgctaccagtgtcgtgcgcgaaatcatgaatcaggat
aatgccgatgctgcggatattgctgagtaa
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