Yersinia enterocolitica WA: CH47_2763
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Entry
CH47_2763 CDS
T03643
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
yew
Yersinia enterocolitica WA
Pathway
yew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CH47_2763 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yew03019
]
CH47_2763 (pcnB)
Enzymes [BR:
yew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CH47_2763 (pcnB)
Messenger RNA biogenesis [BR:
yew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CH47_2763 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AJI82133
LinkDB
All DBs
Position
2966369..2967691
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AA seq
440 aa
AA seq
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MTIIPRDQHNISRRDISDNALKVLYRLNKSGYEAYLVGGGVRDLLLGKKPKDFDITTSAT
PEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQQQTEDSDKNSSQQAQNGML
LRDNIFGTIEDDAQRRDFTINSLYYGISDFALRDYTGGLRDLKEGIIRLIGDPETRYRED
PVRMLRAVRFAAKLDMTISPETAEPIPRLASLLHEIPPARLFEESLKLLQSGYGYKTYLK
LCEYQLFQPLFPLIARNFTEHHDSAMERILVQVLKNTDHRLHNDKRVNPAFLFAAMLWYP
LIEHAQKLTQESGLAYYDAFALAMNDVLDEECRSLAIPKRITSLVRDIWLLQLRLSRRQG
KRAHKLMEHPKFRAAYDLLVLRAEVENNHELQRLAQWWGEFQEATPLQQKNMLNTLGADP
APRRSRPRRPRKPAPRKEGA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacgattattccgcgagatcagcacaatatttcccgtagagatatcagcgataatgcg
ctgaaggttctctatcgcctgaataagtcagggtatgaagcctatttggtcggcggcggt
gtccgtgacctgttactgggtaaaaaaccgaaagattttgatatcaccaccagtgccacc
ccagaacaagtacgaaagttattccgtaactgccgcctggtgggtcgccgcttccgtctg
gcccatgtaatgttcggcccggaaatcattgaagtcgcgactttccgtggtcaccacgaa
cagcaacaaacagaagacagtgacaaaaattcttctcaacaggcacaaaatggcatgctg
ctgcgtgacaacatatttggcacgattgaagatgatgcccaacgccgcgatttcaccatt
aatagtctctattacggtatttctgattttgcactgcgcgactacactggcggtttgcgt
gatctgaaagagggtattatccgtctgattggtgatcctgaaacccgctatcgtgaagat
ccggtgcggatgctgcgcgcagtccgttttgccgccaagctggatatgacgatcagcccg
gaaacagcagagccaatcccgcgtctggcctcgctactgcatgagatcccacctgctcgt
ctgtttgaagaatcactcaaactgctgcaatcgggctacggctataaaacctatttaaaa
ctgtgtgaatatcagcttttccagccgctattcccgctgattgcccgtaattttaccgaa
catcatgattcagcgatggaacgtattttggttcaagtgctgaaaaataccgaccatcgt
ttgcataatgataagcgcgtcaatccggcattcttatttgccgctatgctttggtatccg
cttatcgaacatgcgcagaagctgacacaagaaagcggcttggcctattacgatgctttc
gcactggcaatgaatgatgtgctggatgaagagtgccgttcgctggccattccaaaacgt
attacctcattggtgcgtgatatctggctgctgcaattgcggctgtcgcgccgtcagggt
aaacgtgcgcacaagctgatggagcatccaaagttccgtgcggcttacgatttactcgta
ttgcgggcagaagtggaaaacaaccatgaactacagcgcctggcgcagtggtggggagaa
ttccaggaagcaacgccgctgcaacagaagaatatgctaaatactttaggggctgatccg
gcaccgcgacgctctcgtcctcgccgcccacgtaagccagcaccacgtaaagaaggggca
taa
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