Yersinia enterocolitica WA: CH47_2887
Help
Entry
CH47_2887 CDS
T03643
Symbol
slt
Name
(GenBank) soluble lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
yew
Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yew01011
]
CH47_2887 (slt)
Enzymes [BR:
yew01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CH47_2887 (slt)
Peptidoglycan biosynthesis and degradation proteins [BR:
yew01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CH47_2887 (slt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
SLT_4
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
AJI81986
LinkDB
All DBs
Position
complement(3123411..3125330)
Genome browser
AA seq
639 aa
AA seq
DB search
MDKWRYLAIGVCLVTTSGVAFADSIDAQRQRYQQVKLAWDSNQMNTVAQLMPTLRDYPLY
PYLEYRQLTQDLSQVSAAQVTDFLSRNPTLPPARSLSSRFVNELARREDWRGLLAFSPQA
PKPVAARCNYYYAKWATGEQQVAWDGASEIWLNGQALPGSCDKLFSVWQQAGHQTPLATL
ARMKLALKEGNASLVNYLLKQLPADYQTMGTALAKLQSDPASVESFARTVGPTDFTRSAT
TIAFTRLARQDVENARAMIPTLARLQKMSDSEKLELEEAVAWRLMGTDATYDQAKWRDQV
TLRSHSTPLLERRIRMSLGTGDRQGLAAWMARLPADAQSKDEWRYWRASLLLEQGKKAEG
EAILRSLMQERGFYPMVAAQKLGVPYPINVEVATKPDASLAQRPEIARVRELMYWNMDNL
ARNEWSYLVASRSKPEQEALARYAFNQQWADLSVQATIVAKLWDHLEERFPLAWPKEFRQ
ATEGKGITPSYAMAIARQESAWNPKAQSPVGATGLMQVMPRTAEHTVKLNNIPGYVNSSQ
LLDPVTNIEIGTSYLEEVYQQFGRNRILSSAAYNAGPSRVNTWLGNSGGQVDAVAFIESI
PFSETRGYVKNVLAYDAFYRHFMNRPAKVLSDAEWQRRY
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtggcgatatctggcgattggcgtgtgtctggtgacgacttcaggggtggca
ttcgctgactccattgatgcccaacggcaacgctatcagcaagttaagctggcctgggac
agtaatcagatgaataccgtggcacaattgatgccgacgttacgcgattatccgctgtat
ccgtatctggaataccgccagttaactcaagatttaagccaagtgagtgcggcgcaagta
accgatttcttgagtcggaaccccacgttgccgcctgctcgttcgctgtcatcccgtttt
gtaaacgaactggcgcgtcgtgaagattggcgtggcttattggcattcagtccgcaagcg
cctaaaccggtggcagcccgctgtaattattactacgccaaatgggccactggcgaacag
caagttgcctgggatggtgccagtgaaatttggctcaacggccaggcgcttccgggtagt
tgcgataaattattcagtgtctggcaacaagccgggcatcaaactccactggcaacactg
gcccgcatgaagcttgctcttaaagagggcaatgccagtttggtgaattatttactcaaa
caactgccagcggattaccaaactatgggaacggcattggcgaaactgcaaagtgatcct
gccagtgttgaaagctttgctcgtaccgtcgggccgactgacttcacccgttctgccacc
acaattgcgtttacccgactggcgcgccaggacgtagaaaatgcacgcgcgatgatccca
acattggcgcggctgcaaaaaatgagtgacagcgagaagttggagctggaagaagcggtc
gcttggcgtttgatgggcactgatgcgacttatgaccaagctaaatggcgcgatcaagtc
actttgcgcagccattccaccccgttgctggagcgccgtatccgcatgtcgttgggtacg
ggcgatcgccaaggtttagctgcatggatggcccgtttgccggccgatgcacaaagtaaa
gatgagtggcgctactggcgtgcttcattgttgttagagcaaggtaagaaggccgagggc
gaagccatcctgcgcagtctgatgcaggagcgaggcttctatccgatggtcgccgcccaa
aaactgggtgttccttacccgattaatgttgaggttgcgaccaaacctgatgcctcacta
gcgcaacggcccgaaattgctcgggtgcgcgaattgatgtattggaatatggataatctg
gcacgtaacgagtggagctatttggttgccagccgcagcaaacctgagcaggaagcattg
gcgcgctatgcatttaatcagcagtgggccgatttgagtgttcaggcaaccattgttgcc
aagctatgggaccatttggaagagcgcttccctctggcctggccaaaagaattccgtcag
gcgacggaaggcaaggggataacgccaagttatgccatggcgatagctcgtcaggaaagt
gcctggaacccgaaagcgcaatcgccggtgggagccacaggcctgatgcaggtgatgcca
cggactgcggagcacacagttaaactgaataatattcccggttatgtgaacagcagccag
ttgcttgatcctgtcactaacattgagattggtaccagctatctggaagaggtctatcaa
caatttggtcgcaaccggatcctttccagtgcggcctataacgcaggcccatcgcgggtc
aatacctggctgggaaatagcggcgggcaggtggatgccgtagcatttatcgaaagtatc
ccgttctctgaaacgcgaggttatgtgaaaaacgtattggcttatgatgcgttctatcgt
cactttatgaatcgcccagctaaggtgctgagtgatgccgagtggcagcggcgttactga
DBGET
integrated database retrieval system
