Yersinia enterocolitica WA: CH47_3036
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Entry
CH47_3036 CDS
T03643
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yew
Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yew03016
]
CH47_3036 (truB)
Enzymes [BR:
yew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CH47_3036 (truB)
Transfer RNA biogenesis [BR:
yew03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CH47_3036 (truB)
Prokaryotic type
CH47_3036 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AJI82528
LinkDB
All DBs
Position
complement(3298670..3299659)
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AA seq
329 aa
AA seq
DB search
MGRPRRRGRDINGVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVVARLGQRTDTSDAEGALISEREVNVTQAQMDAALDSFRGSSQ
QVPSMYSALKHQGKPLYEYARQGIEVEREARSITVYELLFIRWEGNDLELEIHCSKGTYI
RTIIDDLGELLGCGAHVSYLRRLQVATYPSDRMVTLEQLTAIVETAQAEERSPNAELDAL
LLPMDSAVLNFPEVNLLPAVAAYVKQGQPVHVAGAPGEGMVRITEGEERNFIGIGTIAED
GRVAPKRLVVEHVDGANPVVAGVAAGNTP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtccacgtcgtcgcggccgtgacattaacggcgttctgttattggataagccg
ctgggcctctcctctaatgatgttttgcagaaagtaaaacgtctctttagcgcaaatcgc
gcaggccataccggtgcactcgatccattggcgaccggcatgttacctatctgtttgggt
gaagcgaccaagttttcccaatttttgctcgattcagataagcgctatcgagtggttgcc
cgtttaggtcaacgcacggatacctcagatgccgaaggcgcattaatcagcgagcgtgaa
gttaatgtcacgcaggcacagatggatgccgcgttggacagtttccgtggtagcagccag
caggtgccatccatgtattctgcgctgaagcatcaaggcaaaccgctgtatgaatatgcc
cgccaagggattgaagttgagcgtgaagcgcgcagtattactgtgtacgaactgctgttt
atccgctgggaaggtaatgacctggaactggaaatccactgttccaaaggcacctatatt
cgtaccattattgatgatttaggtgaattactgggttgcggcgcacatgtgagttatctg
cgtcggttgcaagttgcgacttatccaagtgaccgcatggtgacattggaacagttgact
gcaatcgttgaaacagcgcaagcagaagagcgctcgccaaatgctgaactggatgcgttg
ctattaccgatggatagtgcggtattaaacttcccagaagtcaatctgttacctgctgtt
gcggcctatgtgaaacaagggcaaccagtacatgtagcgggagctcctggtgaaggaatg
gtccgtatcactgaaggtgaagagcgtaatttcattggtattggcacgattgctgaagat
ggccgcgttgctccgaaacgcttggttgtagaacatgtggatggtgcaaaccctgttgta
gcaggtgtagcggcaggaaacacaccgtag
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