Yersinia enterocolitica WA: CH47_3108
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Entry
CH47_3108 CDS
T03643
Name
(GenBank) mechanosensitive ion channel family protein
KO
K22051
miniconductance mechanosensitive channel
Organism
yew
Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yew02000
]
CH47_3108
Transporters [BR:
yew02000
]
Other transporters
Pores ion channels [TC:
1
]
CH47_3108
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AJI85018
LinkDB
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Position
3371781..3375140
Genome browser
AA seq
1119 aa
AA seq
DB search
MRPMISWPLSKLLPFGLLLSFIMLLSLPLHAATQPNEEQLRQELKQAEANKGMANQAEIV
QALQGALSWLADAKESDIRSQQYQKAIDDFPKLTRELRQQLAQEGDKPLPVPNNMSTSEL
EQQVLQISSQLLELSRLSQQEQDRAREISESLNQLPQQQSEARRILTEISSRLQAQNGPT
TPATQAQLALLQAEAVARKAKVNELELSQLSANNRQELSRLRAELYKKRQERVDTQLQAL
RNTLNNQRQQAAEQALERTELLAEQGGDLPASITQQLQINRELSQALNQQAQRIDLISSQ
QRQAVSQTQQVRQALSTIREQAQWLGVSTALGEALRAQVSRLPDVPKSQQLDRDMAQLRV
QRLQYEDMLEKLQQQNVKLTQDDGTPLTTEQQRILDAQWRTQRELLNSLLSGYDTQILEL
TKLKVANSQLVDALSEVREATHRYLFWVADVSPISLSYPVNVAHDLTRLLSLDTLAQLSG
AFVMMMTNQETLLPIIGALLFVGFSISSRRHYHAFLERASSRVGKVTQDHFSLTLRTVFW
SILMALPLPVLWAAVGYGLQNAWSYPMAIAIGNAVTATVPVLWVFMISASFAHPHGLFIT
HFRWSPTQVGRAMRFYRMSVWLIIPLMMALITFENYNDREFAGTLGRLCFILLCIALSLV
TNSLKRAGIPLYLDKKGSGENIVNVALWGLLLSAPLIAALASALGYLTTSQALLARLETS
VAIWFFLLVVYHIIRRWMLIQRRRIAFDRAKQRRADILAQRARGEDDTPHNNSTEGSIDV
EEPVIDLDVISAQSLRLVRSILTMIALVSVIVLWSEIHSAFGFLENIRLWDVSSTINGIE
SVQAITMGSLLIAILVMIVTTQLVRNLPALLELALLQHLDLTPGTGYAISTITKYLLILF
GSLLGFSMLGIEWAKFQWLVAALGLGLGFGLQEIFANFVSGLIILFEKPIRIGDTVTIRD
LTGSVTKINTRATTISDWDRKEIIVPNKAFITEQFINWSLSDSITRVVLTVPAPAETSSE
EVTEVLLTAARRCTLVLDNPPPEVYLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLIL
AGYREHGITLPFPPFQARLETLGRGRVVSSNRSRTPGSL
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtccaatgatttcctggcctttaagcaaattactgccttttggcctgctactgtcg
tttatcatgttgttatccctgccgctgcatgcggcaactcagccgaatgaagaacagctc
aggcaagagttgaaacaggctgaagccaataaagggatggcaaatcaggcagaaattgtt
caggcgctgcaaggggctcttagttggctggcggatgcgaaagaatctgatatccgctct
cagcagtatcaaaaagccattgatgactttcccaagctaacccgcgagctacgccaacag
ttagcacaggaaggggataaacccctgccggtgcctaacaatatgtccacatccgagctg
gaacagcaggtgctgcaaatcagcagtcagttgttagagctgagccgtctgtcacagcaa
gaacaagatcgcgcccgcgaaatcagtgagtcactcaatcaactgccacaacagcaatca
gaagcgcgacgaattctgacagaaatcagctcgcgtttgcaggcgcaaaacggcccaacc
acgccagccacacaggctcagttggcgctattacaagctgaggccgtagcgcgcaaagcg
aaagtcaatgagctggagctttcccagctttccgccaataatcgccaggaattatcacgg
ctacgggccgaactctacaaaaagcgtcaggagcgggtcgatacccagcttcaggcattg
cgtaataccctgaataatcagcgccaacaggccgcagaacaagcacttgagcgaacagag
ctactggctgagcaaggtggcgatttaccggcgtcgattactcagcaattacagataaac
cgtgagttgtctcaagcactgaatcagcaagcgcagcgcatcgatcttatttcctcgcag
caacgtcaggctgtctcacagactcagcaagtccgacaggcactcagcaccattcgtgag
caggcccagtggctaggggtttcaaccgcattaggtgaagcactccgcgcgcaggtttcc
cggttaccggatgtaccaaaatctcagcaattggaccgcgatatggcccagttacgggta
cagcgcctgcaatatgaggacatgctcgagaagttacagcagcaaaatgtcaaattaact
caagatgatggcacgccactcaccaccgaacagcagcggattctggacgcccagtggcgt
actcagcgtgaattattgaactctctgctctccggctatgacacccagattcttgaattg
accaagctgaaagtggctaacagccagctggtagatgccttaagtgaagtgcgtgaggcc
acccaccgttacctgttttgggtcgcagatgtcagcccgatttcactctcctatccagtg
aatgtcgctcatgatcttacccgcttattgtcgctggatacgctggcacagttgagtggg
gccttcgtgatgatgatgactaatcaggagacattgctaccaattattggtgcgctactg
tttgttggtttcagtatcagctctcgccgccactatcatgccttccttgaacgcgccagc
agccgtgtaggcaaagtgacacaagaccatttctccctgacgctacgtactgtgttctgg
tcgattttgatggcactgccgctaccggttttatgggcagcggtcggttatggattgcaa
aatgcctggtcgtatccgatggcaattgccattgggaatgccgtcaccgcgaccgtaccg
gtgctgtgggtatttatgataagtgcttcatttgcccacccgcatggtctgtttattacc
catttccgctggtcaccgacccaagtcgggcgggcaatgcgtttctatcgtatgtcagtg
tggttaattatcccgctgatgatggcactgattaccttcgagaattataacgaccgcgaa
ttcgccggtacactgggccggttatgctttattttgctgtgtatcgccttgagtttggtc
accaacagcttgaagcgagccgggattccgctctatctggataagaaaggttctggcgag
aatatcgttaatgtggcgctgtgggggctgctactatccgcgccattgattgccgcatta
gcgtctgcgctgggttatctcaccacatcacaggcactgttggcacgtctggagacctcg
gttgctatctggttcttcttgttggtggtttaccatattattcgccgctggatgctgatt
cagcgccgccgtattgcctttgatcgtgccaagcagcgacgtgccgatattctggcgcaa
cgcgcccgtggcgaggatgatacgccgcacaataacagcaccgaaggttccattgatgta
gaagaaccggtaattgatctggacgtgatcagcgcccagtctctgcggctggtgcgatcc
attctgaccatgatcgcgttggtttcagtgatcgtactgtggtctgagattcactcggct
tttggtttcctggaaaacattcggctgtgggatgtgtcatcgacgatcaatggtattgag
tcggtacaggcgatcaccatgggatcattattgatcgccattttggtgatgattgtgacc
acccaactggtgcggaacctccctgcgctgctggaactggctctgttacagcatttggat
ctcacgccgggaacaggctatgccatttcgactatcaccaagtatctgttgatcctgttc
gggagcttactcggcttctcaatgttagggattgaatgggcgaaattccaatggctggtt
gccgcactgggtttggggttaggctttggtttgcaggagattttcgctaactttgtctct
ggcttgatcatcttgtttgagaaaccgatccgtatcggcgataccgtgaccatccgtgat
ctcaccggtagcgtaaccaaaattaatacccgtgcgacgactatctctgactgggaccgc
aaagaaattatcgtgccgaataaggcctttatcactgagcaatttattaactggtcactg
tcggattccattacccgtgtagtgctaacggtaccggctccagccgaaaccagcagtgag
gaagtgacggaggtattactgaccgccgcacgtcgctgtacgttggtattagataacccg
ccaccggaggtctatttggtcgatctccagcaagggatccagattttcgagctgcgtatc
tatgccgctgaaatgggccaccgtatgccactgcgccatgagatccaccagctgattctg
gccggttaccgcgagcacggtattaccctgccgttcccacctttccaggcccgtttagaa
acactgggacgtgggcgtgtggtttcttcgaatcgtagccgcacaccgggcagtttgtaa
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