Yersinia enterocolitica WA: CH47_3217
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Entry
CH47_3217 CDS
T03643
Symbol
fadB
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
yew
Yersinia enterocolitica WA
Pathway
yew00071
Fatty acid degradation
yew00280
Valine, leucine and isoleucine degradation
yew00310
Lysine degradation
yew00362
Benzoate degradation
yew00380
Tryptophan metabolism
yew00410
beta-Alanine metabolism
yew00640
Propanoate metabolism
yew00650
Butanoate metabolism
yew00907
Pinene, camphor and geraniol degradation
yew00930
Caprolactam degradation
yew01100
Metabolic pathways
yew01110
Biosynthesis of secondary metabolites
yew01120
Microbial metabolism in diverse environments
yew01200
Carbon metabolism
yew01212
Fatty acid metabolism
Module
yew_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CH47_3217 (fadB)
00650 Butanoate metabolism
CH47_3217 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CH47_3217 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CH47_3217 (fadB)
00310 Lysine degradation
CH47_3217 (fadB)
00380 Tryptophan metabolism
CH47_3217 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CH47_3217 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CH47_3217 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CH47_3217 (fadB)
00930 Caprolactam degradation
CH47_3217 (fadB)
Enzymes [BR:
yew01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CH47_3217 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CH47_3217 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CH47_3217 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CH47_3217 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AJI84344
LinkDB
All DBs
Position
3496514..3498703
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQSETLQLHWLENGIAELVFDAPGSVNKLDTQTVANLGEALVVLEKQSELKGLLLRSA
KAAFIVGADITEFLSLFNEPPEKLHQWLVFANDIFNRLEDLPVPTIAAINGYALGGGCEC
ILATDFRVASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIIAKDALK
VGLVDAVVAPEKLVDAALSMLKQAIDGKLDWQAARRPKLGPLKLNPTEAAMCFTIAKGMV
MQVAGKHYPAPLTAVKTIEAAAKFGRAEALILETNSFVPLAGSNEARALVGIFLNDQYVK
GQAKKLSKGVSAPKQAAVLGAGIMGGGIAYQSALKGVPVIMKDINDKSLTLGMNEAAKLL
NKQLERGKIDGLKMANILATIQPTLDYVGIERAQVIVEAVVENPKVKAAVLAEVETLIGE
ETVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGTKTSDKTIAAVVAY
ATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAVGFPERMNKDYRDAVDVMFDNQRFGQKNGQGFYRYTQDTKGKP
RKENDEQVDALLAQVSQPLQKFSDDDIIARTMIPMINEVVRCLEEGIIASPAEGDMALVY
GLGFPPFHGGVFRYLDTIGSANYVEMAQRYTHLGPLYQVPPGLRAKAEHNESYYPVAAAL
LDVSISQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaagcgaaacactacagcttcactggctggaaaacggcattgccgagttg
gtgtttgatgcaccaggttcagttaataagctggatacccaaactgtagccaatctgggc
gaagccttggttgtgttagaaaaacaaagtgagctcaaagggttgctattacgctcagcc
aaagcagcctttattgtcggtgccgatatcaccgagtttctatccctgtttaacgagccg
ccagaaaagttgcatcaatggttggttttcgccaacgatattttcaatcgtttggaagac
ttaccggtgccaaccattgcagcaatcaatgggtatgcgctgggtggcgggtgtgaatgt
atcttagccactgattttcgcgtggcctcgccagaagcacgtatcggtctaccggaaacc
aaactcggtatcatgccgggcttcggcggttcagttcgtttgccacggttattaggcgca
gacagtgcgctggaaattattgcggctggcaaagacattattgccaaagatgccttaaaa
gttgggctggttgacgccgttgtcgcccccgaaaagttggtcgatgccgcgttaagtatg
ttgaaacaagcgattgacggaaaactcgactggcaagctgcacgtcgtccgaaattaggg
ccactgaagctcaatccgaccgaagccgcgatgtgctttaccattgccaaaggcatggtc
atgcaagtcgccggtaaacactatccggcgcccttgactgccgtcaaaactattgaggcc
gctgcaaaatttggccgcgctgaagcattgatactggaaaccaatagttttgttccctta
gctggttccaatgaagcgcgtgcattagtcggtattttcttgaatgaccaatatgttaaa
ggtcaggctaaaaagctgtccaaaggtgtcagcgcccccaaacaggccgcagtgctgggt
gcagggattatgggcggtgggattgcctatcagtcggcactgaaaggtgtgccggtcatt
atgaaagatattaatgacaaatccctcacattagggatgaatgaagcggccaagttgctg
aataagcagttggagcgcggcaagatagatggcctgaaaatggcaaatatcttagcaacc
atccaaccaacattagattatgtcggcattgaacgcgcccaagtcatcgtggaagcggtg
gtagaaaatccaaaagtcaaagcggcggttctggcagaggttgaaacgcttatcggcgaa
gaaactgttctggcttctaacacttctacaattccgattgatcagctcgccaaatccctg
aaacgcccagaaaacttctgtggcatgcatttcttcaatccagtacaccggatgccgttg
gttgaaattattcgtggcaccaaaacttcagataagactatcgctgcagttgtggcatac
gccacgcaaatgggtaaaaccccgattgtagtcaatgattgcccaggcttctttgttaac
cgtgttttattcccgtatctggctggattcggcatgttagtccgagacggtgcggacttc
cgccaaattgataaagtgatggaaaagcaatttggctggccaatgggccctgcttatcta
ttagatgtggtgggcattgataccgcgcaccatgcacaggccgtgatggccgttggtttc
cctgagcgcatgaataaagattatcgcgatgcggttgacgtgatgtttgataaccaacgg
tttggtcaaaagaatggccaaggcttctaccgctatacccaagataccaaaggcaaaccg
cgtaaagagaatgatgaacaagtagacgcgttactggcgcaagtcagccagccgcttcag
aaatttagcgatgacgatattatcgcccgtaccatgatcccgatgatcaatgaggtggtg
cgatgtctggaagaaggcattattgccagcccggctgaaggtgatatggcgttggtatat
ggccttggattccctccattccacggcggcgtcttccgttaccttgataccatcggcagt
gcaaattatgtcgaaatggctcaacgctacacccatcttgggccgttgtatcaagtcccg
ccgggattgagagccaaagccgaacataacgaaagctattatcctgtggcagcagcgctg
cttgatgtttctatcagtcaaccggcatga
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