Yersinia enterocolitica WA: CH47_3436
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Entry
CH47_3436 CDS
T03643
Symbol
slmA
Name
(GenBank) HTH-type protein slmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
yew
Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yew03000
]
CH47_3436 (slmA)
03036 Chromosome and associated proteins [BR:
yew03036
]
CH47_3436 (slmA)
Transcription factors [BR:
yew03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CH47_3436 (slmA)
Chromosome and associated proteins [BR:
yew03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
CH47_3436 (slmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
HEAT_ULK4
DUF6262
TetR_C_6
Motif
Other DBs
NCBI-ProteinID:
AJI84105
LinkDB
All DBs
Position
3737808..3738404
Genome browser
AA seq
198 aa
AA seq
DB search
MAEKENTKRNRREEILQALAQMLESSDGSQRITTAKLAANVGVSEAALYRHFPSKTRMFD
SLIEFIEDSLMSRINLILQDEKETFNRLRLILLLVLGFAERNPGLTRIMTGHALMFEQDR
LQGRINQLFERIEVQLRQVLREKKLRDGQGFIHDEALLATQLLAFCEGMLSRFVRSEFRY
RPTQEFDARWPLIVTQLQ
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaagaaaatacgaaaaggaacaggcgcgaggaaattttgcaggctttagcg
caaatgctggaatccagcgacggtagccaacgcattactactgctaaactcgccgcgaat
gtgggggtttcggaagcagcgctttatcgtcatttccccagtaaaacgcggatgtttgat
agcctgatcgagtttattgaagacagtctgatgtcccgcatcaatttgattctgcaagat
gaaaaagagacgtttaatcgcctccggctgatcctgctactggtattggggtttgcagaa
cgtaatccagggctgactcgcattatgaccgggcatgcattgatgttcgagcaagaccgc
ttgcaagggcgtattaaccagttgtttgagcgaattgaagtacagctacgtcaagtattg
cgtgagaaaaaactgcgcgatgggcaaggttttatccatgatgaagccctgctggcaaca
cagctactggcgttttgtgaagggatgctctcacgttttgttcgttcggaatttcgctac
cggccgacgcaagaatttgatgctcgctggcctctaattgtgactcagctccaataa
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