Yersinia enterocolitica WA: CH47_3455
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Entry
CH47_3455 CDS
T03643
Symbol
gmr
Name
(GenBank) cyclic di-GMP phosphodiesterase Gmr
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
yew
Yersinia enterocolitica WA
Pathway
yew02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH47_3455 (gmr)
Enzymes [BR:
yew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CH47_3455 (gmr)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
RIP
Motif
Other DBs
NCBI-ProteinID:
AJI82114
LinkDB
All DBs
Position
3754470..3756464
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AA seq
664 aa
AA seq
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MFQDQDTSILNTYFGTHRPFWRLAFDSQALELSAIKEIANIAIPLNSVQTMKIRSLTGIT
ASLDIEIEIYGHPLHLHLVGRKINDKEWGGTASAYADTESVARDLVMGLSFAEQVVSEAN
SVIVILDKDGCVQRFNHLSEEYTGKKEQDVIGKNVYDLFMTAKEGASSRKNIEGFFQRGA
SYEAERWVNTVKGKRLFLFRNKFVHSGSGKNERYLICSGTDITKERRAQERLRILANTDM
ITGLPNRHAIHERINSAIQTRGDSSVGIIYLDLDNFKKVNDHYGHMFGDRLLKDVSLAIL
SCLGDNEMLARLGGDEFIVLVENATLDLLETTTQRILNRMKLPFRIGLIEVYTGCSIGIA
LCPEHGDTLENIIRSADTAMYTAKEHGKQTYSIFSQQMNKKVSEYVWLDTNLRKAIEQHQ
LQIFYQPKISTKTGKVLGVEALVRWLSPERGLIAPQEFISYAEESGLIRPLGKWVLQTSM
QQAVDWKKRGINLRIAVNVSARQLIDEAIVTSFIESLEACELEFSLVDVELTESCLIDNE
DAAINIMKQLRHLGAQVHLDDFGTGYSSLSQLARIPIDAIKLDQSFVRHIDTNPISQSLV
RAIIVVAEALKMQVIAEGVETKEEEEFLDSIGVDEKQGFLYAKPMPADKLEHWLVTQHPH
LLLD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagaccaagacacgtcgatcctcaatacctactttggtactcatcgcccattt
tggcggcttgcctttgatagccaggctttagagctgtcggcaattaaagagatagcaaat
attgcgatacctcttaattctgttcaaacaatgaaaatccggagcttaaccggtattacc
gccagtttagatattgaaattgagatttatggtcacccccttcatttacatcttgttggc
cgaaaaattaatgacaaagagtggggggggacagcctcagcctatgccgatactgaatct
gtcgctcgtgatttggttatgggcctttcttttgcagaacaggttgtttctgaagccaac
tcagtgattgtgattctcgataaagatggctgcgtgcagcgatttaaccaccttagcgag
gaatataccggtaagaaagagcaggatgttattggcaaaaatgtttacgacttatttatg
accgccaaggaaggagcctcatcacggaagaatattgaggggttttttcagcgcggtgca
tcttatgaagcggaacgttgggttaataccgtcaaagggaagcgtctcttcttattccgc
aataaatttgttcacagtggtagcggaaaaaacgaacgctatcttatctgttccggtact
gacattaccaaagaacgacgcgcccaagagcgccttaggattttggctaataccgatatg
attaccggtttgcctaaccgtcatgccattcatgagcgcattaacagcgcaatccaaacc
cgcggtgacagctcagtgggtattatttatctcgatctcgataacttcaaaaaagtaaat
gaccactatggtcatatgtttggtgatcgattactgaaagatgtctcgctggcaatttta
agttgcttgggtgacaacgaaatgcttgcccgattagggggggatgagtttattgttctg
gtcgaaaacgccaccttggatttgctggaaacaaccacacagcgaattctcaatcgcatg
aaattgccattccgaattggattgatagaggtatataccggctgttcaattggcattgca
ctatgcccagagcatggtgatacgctagaaaatattatccgcagtgcggatacagccatg
tataccgcgaaggaacatgggaaacaaacctattccatcttctcgcaacaaatgaataaa
aaagtatccgagtatgtttggctcgataccaatttacgcaaagctatagaacaacatcaa
ttacaaatcttttaccaacccaaaatatccaccaaaacgggaaaagtgctcggtgtcgaa
gctctcgtcagatggctatcgcctgaacgaggtttaattgctcctcaggagtttatctca
tatgcggaagagtctgggcttatcaggcccttgggtaaatgggtactacaaacgtctatg
caacaggctgtggattggaaaaaacgtggaattaacctacgaattgcagtcaatgtttct
gcccgacaattaattgatgaagctatcgtcaccagttttattgagtctcttgaagcctgt
gagttggagtttagcttggtcgatgttgaattaactgaaagttgcttaattgataatgaa
gatgccgctatcaatataatgaagcagctacgccacttaggtgctcaagttcacttagat
gattttggtactggttattcttcactctcccagttagcgcgcatccctatagatgccatt
aaactggatcaaagttttgttcgccatatagacactaatcctatttcacaatctttggta
agagccattattgttgtcgccgaggcactaaaaatgcaagtcattgccgaaggagtggaa
acgaaagaggaagaggaattcctggattctattggcgttgatgagaaacagggattcctt
tacgccaaaccaatgcccgcagataaattggagcattggctggtaacacaacaccctcac
cttttactggattag
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