Yersinia enterocolitica WA: CH47_3996
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Entry
CH47_3996 CDS
T03643
Name
(GenBank) bacterial regulatory helix-turn-helix, lysR family protein
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
yew
Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yew03000
]
CH47_3996
Transcription factors [BR:
yew03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CH47_3996
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AJI82622
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Position
complement(4338024..4338935)
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AA seq
303 aa
AA seq
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MERLKRMSVFAKVVECGSFTGAARQLAMSVSSISQTVSKLESELNVKLLNRSTRRIGLTE
AGRIYYQGCRRMLQEVQEVHEQLYAFNNTPTGTLRIGCSSTMAQNVLATMTAEMLKEYPG
LSVNLVTGIPAPDLIADGLDVVIRVGALQDSGLFSRRLGSMPMVVCAAKSYLAQHGTPEK
PSDMTNFSWLEYSVRPDSNFELIAPEGITTQISPQGRFVTNDSQTMIRWLKAGAGIAYAP
LMWVIEEIKRGEVEVLFKKYHSDPRPVYALYTEKDKMPLKVQVCIDYLTEYFKRVAEVYQ
GYR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggaaagattaaaacggatgtcagtctttgccaaagtcgtcgagtgcggatcctttacc
ggcgcggcacgacagttggcaatgagtgtgtcttcgataagccaaacggtgtcaaaacta
gaatccgagttaaatgtgaagctgcttaaccgcagcacccggcgtattggtttgacggaa
gcgggccggatttattatcagggctgtcggcgcatgttgcaggaagtgcaggaagtgcat
gagcaattgtatgcgtttaacaataccccgaccggcacactacgaatcggttgttcttca
actatggcacaaaacgtgctggcgaccatgacggctgagatgttgaaagaatatcccggg
ctttccgtcaatctggtgaccggcataccggcaccggacttgattgccgacggtttagat
gtggtgattcgtgtaggcgcgttacaagattcagggctattctcgcgccgccttggttct
atgccgatggtagtctgcgcggccaaaagttatttagcgcaacatggcacaccggaaaaa
cccagtgatatgacgaacttctcctggctggaatacagtgtacggccagatagcaatttt
gaattaatcgcacctgagggtattacaactcagatatcaccgcagggacgttttgtgact
aacgactcgcaaaccatgattcgttggcttaaagcgggggccggtatcgcctatgcacca
ttaatgtgggttattgaagaaataaagcgtggtgaagtggaagtgctattcaaaaaatac
cattctgacccacgaccggtatatgcactatataccgagaaagataaaatgccgctcaaa
gtccaggtctgtatagattatttaactgaatactttaaacgagtcgcagaggtatatcag
ggttatagataa
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