Yersinia enterocolitica WA: CH47_4013
Help
Entry
CH47_4013 CDS
T03643
Name
(GenBank) beta-eliminating lyase family protein
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
yew
Yersinia enterocolitica WA
Pathway
yew00450
Selenocompound metabolism
yew00970
Aminoacyl-tRNA biosynthesis
yew01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CH47_4013
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CH47_4013
Enzymes [BR:
yew01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
CH47_4013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SelA
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJI82784
LinkDB
All DBs
Position
4352420..4353532
Genome browser
AA seq
370 aa
AA seq
DB search
MSSVYEKYQLKHVINASGRMTMLGVSTPRQDVVEAVELGLNHYFVMKDLVNQTGAYIAKL
LNVESAVVVSCASAGIAQSVAAVIVKDNANLLVNLHAAPRTVPHEIVLPKGHNVNFGAPV
DTMVTLGGGKVVEAGYANECLPEQLEAAITPNTAAILYIKSHHCVQKSILSVEQAVVIAR
KHQLPLIVDAAAEEDLQCYYQMGADLVIYSGAKAIEGPTSGLVLGKKIYVDWVKLQSNGI
GRAMKVGKEGILGLTRAIESYITLEKETGQQMIEKMTPFISQLNTIDGVLAKVVWDAAGR
DIARTEISFDETKIGRSTPDLVDALKNGDIAIYFRAYKANEGKIEVDVRSVTPAQLETIY
TCINRLVKGA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtctatgaaaaataccagttaaagcatgtgattaatgcttctggccgcatg
acgatgctgggggtttcgacgccacgccaggatgtggtcgaagctgtagagttgggcctg
aatcattactttgtcatgaaagatttagtgaatcagaccggcgcttatattgcgaagtta
ctgaatgtagaaagtgccgtggtggtgtcttgtgcttcggctgggattgcccagtcggtc
gcggccgtgattgtcaaagacaacgccaatttgctggtgaatctgcacgccgcgccgcgc
actgtgccccatgaaattgttttacccaagggccacaatgttaactttggtgcgccagtc
gatactatggtgacattgggtggcggcaaagtggtggaggcgggctatgccaatgagtgc
ctaccagaacagctggaagcggcgatcacgccgaatactgcggcaatcttgtatataaaa
tcccatcattgtgtgcaaaaaagcattctgtctgttgaacaggcggtggtaattgcacgc
aagcatcaactgccattaattgttgatgcagctgcggaagaagatttgcagtgctactac
caaatgggcgctgatttggtgatttacagcggagccaaagcgattgaaggcccaaccagt
ggcttagtgttgggcaaaaaaatctatgtggattgggtgaaattgcaatcaaacggcatc
ggtcgggcaatgaaagtgggtaaagagggcatccttggcttgacccgcgctatcgaaagt
tacatcacgctggagaaagaaactggccagcagatgatagagaaaatgacgccgtttatc
agccagttgaataccattgatggggttttagccaaagtggtttgggatgcggcggggcgc
gatattgcccgcacggaaatcagttttgatgaaactaaaattggccgttcgacgcccgat
ttggttgatgcgctaaaaaatggcgatatcgctatttacttccgtgcttacaaagccaac
gaaggcaagattgaggtagatgtgcgcagtgtcacgccagcgcaacttgagactatttac
acctgtattaaccgcctggttaaaggagcctaa
DBGET
integrated database retrieval system
