Yersinia enterocolitica WA: CH47_561
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Entry
CH47_561 CDS
T03643
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
yew
Yersinia enterocolitica WA
Pathway
yew00300
Lysine biosynthesis
yew01100
Metabolic pathways
yew01120
Microbial metabolism in diverse environments
yew01230
Biosynthesis of amino acids
Module
yew_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CH47_561 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yew01002
]
CH47_561 (dapE)
Enzymes [BR:
yew01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CH47_561 (dapE)
Peptidases and inhibitors [BR:
yew01002
]
Metallo peptidases
Family M20
CH47_561 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AJI81371
LinkDB
All DBs
Position
complement(582488..583615)
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AA seq
375 aa
AA seq
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MICPVIDLAQQLIKRPSLSPNDAGCQEIMIQRLEAIGFTVEPMNFGDTLNFWAWRGEGET
LAFAGHTDVVPTGDESHWCSPPFEPTIRDGMLYGRGAADMKGSLAAMVVAAERFVAAHPN
HKGRLAFMITSDEEAKAINGTVKVVNALMARHERLDYCLVGEPSSTDRVGDVVKNGRRGS
VTANLHIHGIQGHVAYPHLADNPVHRAIPALNELVTTQWDEGNEFFPATSMQIANLHAGT
GSNNVIPGEFYVQFNFRFSTELTDSMIKQRVEALLERHQLDYTLEWVLSGQPFLTARGAL
VDAVVNAVEHYAEITPQLLTTGGTSDGRFIALMGAQVVELGPVNATIHKVNECVHAADLQ
LLSRMYQKIMEQLIA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgatctgtccggtaatcgacctggcccaacaattaattaaacgcccgtcgctcagccct
aatgatgcaggttgccaggagatcatgattcagcgtttagaagctatcggttttactgtc
gaaccgatgaattttggcgacactctcaacttctgggcctggcgtggcgaaggcgagaca
ttggcgtttgctggtcataccgatgtggttcctaccggcgatgaaagccattggtgcagc
ccaccgtttgagccaaccattcgcgatggcatgctgtatggccgtggtgctgccgacatg
aaaggttcactggcggcgatggtggttgcggcggagcgctttgtggccgcacatcctaat
cataaaggtcgcctggcatttatgattacctccgatgaagaagccaaagctattaatggc
accgttaaagtggttaacgccctgatggcgcgtcatgagcgactggattactgcctggtg
ggtgagccatccagtaccgaccgcgtcggcgatgtggtgaaaaatggtcgccgaggctct
gtcaccgctaacttacatatccacggtatccaagggcatgtggcttatcctcatctggct
gataaccccgttcaccgtgcgatacccgcgctgaatgaactggtgacgacacaatgggac
gaaggcaatgagttcttccccgccaccagcatgcaaatcgctaacttgcatgccggtact
ggcagcaataacgtgattcccggtgagttctatgtgcagttcaatttccgcttcagcact
gaactgactgatagcatgattaagcagcgggttgaggcattgctggagcgtcatcaactc
gattacaccctggaatgggttctatctggtcagccattcctgactgcgcgtggtgcgttg
gttgatgctgtggtcaatgccgttgagcattacgccgagataacgccgcaactgttgacc
accggtggcacctctgatggccggtttattgccttaatgggggcacaagtggttgaacta
gggccagttaatgccacaatccataaagtgaatgaatgtgttcacgctgctgatttacaa
ctgctaagccggatgtatcagaaaatcatggagcaactcatcgcatga
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