Yersinia enterocolitica subsp. palearctica Y11 (serotype 0 3): Y11_10381
Help
Entry
Y11_10381 CDS
T02010
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
yey
Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3)
Brite
KEGG Orthology (KO) [BR:
yey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yey03016
]
Y11_10381
Enzymes [BR:
yey01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Y11_10381
Transfer RNA biogenesis [BR:
yey03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Y11_10381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
CBY27143
UniProt:
A0A0H3NRF2
LinkDB
All DBs
Position
1063924..1065858
Genome browser
AA seq
644 aa
AA seq
DB search
MFQDNPLLAQLKQQLHTQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
IATLHTDKDREIAEPETLVEPFLSRFVGRVQRKDDRLSIVPDHPLLRDAIQCRPVRELTH
DFQTGDWAVAEMHRHPLKGDRGFNADLTAFITDGEDHFVPWWVTLARHNLEREAPVMVES
ALHDANLQREDLTALNFVTIDSVSTEDMDDALHVQDNGDGSLLLTIAIADPTAYVDENSE
LDLIARKRAFTNYLPGFNIPMLPRDLSDNLCSLRPNERRPVLVCRVTIAADGTLGEGIHF
SAAWVESKAKLVYDEVSDWIEGSGDWQPQNADIAEQITLLKRVCEARSNWREKHALVFKD
RPDYRFLLGEKGEVLDIIVEHRRIANRIVEECMIAANVCAAIALRDNLGFGIYNVHTGFD
PALVEQAANVLQANGVEADPQALLTLPGFCELRRHLDALPTQFLDSRIRRFQTFAEISTV
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIITGQQAEKPQDEITVQLAERRRLNRM
AERDVGDWLYARYLQPMAGTDTRFPAEIIDVTRGGLRVRLLDNGAVVFIPAPFIHAVRDE
MVCSQETGTVQIKGDTVYSQSDKIEVRIAEVRMETRNVVARPVV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctggcgcagctaaaacagcaacttcacactcagactcca
cgcgtcgaaggcgtagttaaaggtactgagaaaggctttggctttcttgaggtagacggg
cagaaaagctactttattccgccgccacaaatgaaaaaagtcatgcatggcgatcgtatt
attgccactcttcacaccgataaagatcgtgaaattgctgagccggaaaccctggttgag
ccatttttatcccgatttgttggccgtgtgcaacgaaaagatgaccgcctgtctatcgtt
cctgaccatcctctgctgcgtgatgccattcaatgtcgtccagtgcgtgaactgactcac
gatttccagaccggtgattgggcggtggccgagatgcaccgccatccattaaaaggcgat
cgtggctttaatgccgatctgactgcttttattactgatggtgaagatcacttcgtgcct
tggtgggtcaccctggcgcgccataatctggagcgtgaagcgccagtcatggttgaatca
gcgttacatgatgccaacctgcaacgggaagatttgactgcgcttaattttgtcactatc
gacagcgtcagcaccgaagatatggatgacgcgttgcatgtgcaagacaacggtgacggc
tcgctgttgttgaccattgctattgctgaccctactgcttatgtcgatgaaaacagtgag
ttggacttaattgcccgtaaacgtgcatttaccaactatctgccgggctttaacatcccg
atgctaccgcgtgatttatccgataatctttgctcactgcgaccaaatgaacgccgcccg
gtattggtgtgtcgcgttactattgctgctgatggcacgctcggtgaaggcattcacttc
tctgccgcctgggttgagtcgaaagccaaactggtttatgacgaagtctctgattggata
gaaggcagtggtgactggcagccacaaaatgctgatatcgctgaacaaatcacattatta
aaacgtgtttgcgaagcgcgcagcaattggcgtgaaaagcatgcattggtgtttaaagac
cggcctgactaccgcttcttgttgggcgaaaaaggcgaagtgctggatatcattgttgaa
caccgccgcattgctaaccgtattgttgaagagtgcatgattgccgccaacgtctgtgcc
gctattgcgctgcgtgataatcttggttttggcatctataacgtgcataccggttttgat
cccgcgctggttgagcaagccgctaatgtgttgcaagccaatggggtggaagccgatccg
caagcattgctgaccttacctggtttctgtgaattgcgccgtcatcttgatgccttaccg
acccagttccttgatagtcgcatccgccgtttccagacattcgctgaaatcagcaccgtt
cccggcccacacttcggtttagggcttgaagcttacgccacctggacctcgccaattcgt
aaatacggcgatatggtcaaccatcgtctgctgaaagccattattactggtcagcaagcg
gaaaaaccacaagacgaaatcacggttcaattggccgaacgccgccgtttgaatcgcatg
gctgaacgtgatgtcggtgattggttatatgcccgttacctacaaccgatggcaggcacg
gatacgcgcttcccggcggaaattattgatgtcactcgcggtggcctacgggtgcgctta
ctggataacggcgcagtcgtctttattcctgcgccctttattcatgcggtgcgtgatgag
atggtgtgcagccaggaaacaggcaccgtacaaatcaaaggtgatacggtttacagccag
agcgacaaaattgaagtgcgcattgccgaagtgcggatggaaacccgcaacgtggtggcc
cgtccagtggtttga
DBGET
integrated database retrieval system
