Yersinia enterocolitica subsp. palearctica Y11 (serotype 0 3): Y11_21051
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Entry
Y11_21051 CDS
T02010
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
yey
Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3)
Brite
KEGG Orthology (KO) [BR:
yey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yey03400
]
Y11_21051
DNA repair and recombination proteins [BR:
yey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Y11_21051
Archaeal homologous recombinant proteins
Y11_21051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
SMC_N
AAA_21
cobW
nSTAND3
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CBY26076
UniProt:
A0A0H3NLR2
LinkDB
All DBs
Position
2129130..2132819
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AA seq
1229 aa
AA seq
DB search
MRILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGTRYRAFWSQRRAKNSPEGNLQAPKVELALCEN
GKILADKVRDKLDMVAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTDI
YGRLSEHVFEQHKQAKIALDALHQRASGIELLNEEQRADLAQQLDVLGEQEKQLASEQRV
NQKQINWLAGWLQQQKNVLEYQQQQKIIEQEYLQAQPELQRLARSEPAEKLRPLLRECSR
SLQDLQQIQLRITTLTQQQQQLQTQLTPLTQALEQANLARQQHATNQHEQETLIEQKVIP
LDNLIAQQQHSLMLLGTQLEQLRTKENQNKQQLELSKQQSKLAHQRLQQLTEYTQQHAHH
QHWEKNLPLWREQFRQLQMQQQQSVESEQQLQQQATLLATLQQQIDTLNEQDKQQQAALV
QAHSQTGSIQQQLSALEQQQPSAQLRQQLIELQQQRPVRQQLAALSPLAQQVQALHDKQQ
QQFVAQQQQLQLLEQQLAEKRQLYKQQKQHLTDLETLLEREKQIVRLESERAKLQPGEAC
PLCGALDHPAITEYQAVKPSETAVRVEELRLQVEQLFTAGTELRTQVASMQQQQLRLEQE
LQHSQQQLTDYHQQWHALTQPLTLTFALNEPETLITWLEQQEQSEQTCQLKLAEYERLNQ
QYQQAKDILTQAEQQQQKHQQQLALISQRRQDAEQAHQKLHAQHQHQLVELAKTRQDFSH
ALAELSLSMPEADQQQSWLAVREEENQRWHQYQQEQQQLALGQKALETQIENERRHLQEC
IDQLSILTQQHQQTETLLQQQKQQRQALFGDSSVVEARQLLRQQQQQVELAQQNTAQALQ
QAQSQLNLLSGELTGLEQQCNQNQQRATAAQAELRQALASSEFDDEAALTAALLSEEERQ
RLQQLQQQLSERQQQANIRHQQASEALAQLIQSCPDGVDQTSELAVLQRQSEQLLAQLKA
NTLRQGELRNQLESDIIRRRNQHALFEQIEHNQQQYDDWSYLNHLIGSKEGDKFRKFAQG
LTLDHLVYLANNQLSRLHGRYQLQRKTSDALELQVVDTWQADAIRDTRTLSGGESFLVSL
ALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDTALDALDSLNASGKTIGVISHVEAMK
DRIPVQIKVKKVNGLGVSRLDNIFRVNQD
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttaagcctacggctgaaaaacattaattctctacagggtgaatggaagata
gatttcaccgccgaaccttttgccagcaacggtttattcgcgataaccggcccgactggg
gcagggaaaaccaccctgctcgatgccatttgtctcgcgttataccaccagaccccgcgg
ttgaatgtcacccccagccaaaacgaactgatgactcgccacacggcggagtcactggct
gaagtcgagtttgaggtaaaaggaacgcgttatcgtgctttctggagccaacggcgcgct
aaaaatagcccggaaggaaatctgcaagcgcctaaagttgagttggcgctatgcgaaaac
ggcaagattctggccgataaagtgcgcgataagcttgatatggttgccgcaatcaccggg
ctggattttggccgctttaccaaatcgatgatgctgtcacaggggcaatttgctgcattt
ctcaatgctgatgccaatgatcgcgcggaattattggaagagttaaccggtacggacatc
tatggtcggttatctgaacacgtatttgagcaacataagcaagccaagatcgcactagat
gcattgcatcaacgcgccagcggtattgaactgctaaatgaagagcagcgtgcagatctg
gcgcaacaattagatgtactcggtgaacaagaaaagcagcttgcttcagaacagcgggta
aatcaaaagcaaataaattggctcgccggatggctgcaacagcaaaaaaatgtgttggaa
tatcaacagcagcagaaaatcattgagcaagaatatctgcaagcacaacccgaactgcaa
cgcttggcccgtagtgaaccagcagaaaagttacgccccctattacgcgagtgttcccgt
agcctacaggatttgcagcagatacaactgcgcatcaccacactgacgcagcagcaacag
caacttcaaacacaactgacgccactgactcaggcgctggagcaagccaatcttgcccgc
cagcaacacgcaactaatcagcatgagcaagaaacactgatcgagcaaaaagtcattccg
ctggataaccttattgctcagcaacagcactcattaatgctactaggtacgcaacttgaa
cagttacgcaccaaagaaaatcaaaataaacaacaacttgaactgagtaaacaacagtcc
aagctagctcaccagcgcctgcaacaactgactgagtacacccaacagcatgcccaccat
caacactgggaaaaaaacctacctttgtggcgtgagcagttccgccaattacaaatgcag
caacaacaatcagttgaaagcgaacagcagttgcaacagcaagccacgttactggcgacc
ttacaacagcaaattgacacactgaatgaacaagataaacagcaacaagctgcattagta
caagcccactcgcagaccggtagtattcagcaacaattgtcagcacttgagcaacaacag
ccctccgcgcagttacgccaacaactcatcgagctacaacaacaacggcctgtgcgacag
caattagcggcattatcgccattggcgcaacaagttcaggcgttgcatgataaacagcaa
cagcagtttgttgcccaacagcagcaactacaattactcgaacaacagctagcagaaaaa
cgtcagttatataaacaacaaaaacagcatctgactgatctggagactttgctggaacgc
gaaaaacaaatcgtccggttagagtctgaaagagccaaactgcagccaggagaagcatgc
ccattatgtggtgcattggatcaccctgccattactgagtatcaggcagtaaaaccctca
gaaacggcggtgcgagtagaagaactgcgacttcaggttgaacaacttttcactgcggga
actgaattacgcactcaggtcgcaagcatgcagcaacaacagttgcgcctggagcaagag
ttacagcacagccagcagcaactgacagattatcaccagcaatggcatgcactgacacaa
ccattaacgctaacatttgcgttgaatgaacctgagaccttaataacctggttggaacaa
caagaacaatcagagcaaacctgtcagctaaaactggcggaatatgaacgattgaatcag
caatatcaacaagctaaagatattctgactcaagcagaacagcagcagcaaaaacatcag
cagcaattggccctaattagtcagcgccgacaagatgccgagcaagcgcaccaaaagttg
catgcacaacatcaacaccaactggttgaattggcaaaaacacgtcaagactttagccat
gctctggctgagttatcgctatcaatgcctgaagcagaccaacaacagagctggctggca
gtgcgggaagaggaaaatcagcgctggcaccagtatcagcaggaacaacaacagttggcg
ctggggcaaaaagcactggaaacgcagattgaaaatgaacgtcgccacctgcaagagtgc
attgatcagctatctatactcacacaacaacatcagcagaccgagacactgttgcagcaa
caaaagcaacaacgtcaggcgctatttggtgacagcagtgtggtagaagcccgccagtta
ttgcgccaacaacagcaacaagtagaactggctcaacaaaatacagcacaagccctgcaa
caggcacaatctcaacttaacttgctctccggcgaactaacggggctagaacaacagtgc
aatcaaaatcaacaacgagccaccgctgcccaagctgaattacgacaagcactggcaagc
agtgaatttgatgatgaggcagccttaaccgccgcactcctgagtgaggaagaaaggcag
cgtttgcagcaattgcaacagcaactgagtgagcgccagcaacaggccaatatccgtcac
caacaagccagtgaagcattggctcaactgatacaatcttgccctgatggcgtcgatcaa
acatctgaattggcagtattacagcggcaatcagaacaattactggcccaactgaaagcc
aataccttacggcaaggtgaattacgcaatcagctagaaagcgacataattcgacgtcgc
aaccaacatgcactgtttgagcaaattgaacataatcagcaacaatatgatgactggagc
tatctcaatcacttaattggctctaaagaaggtgataaattccgcaagtttgcccaaggc
ttgacactcgatcatttggtctatctggcaaacaaccaactcagccgcctacatgggcgc
tatcaattgcagcgtaaaaccagcgacgcgctggaactacaagtggtggatacctggcaa
gcggatgctatccgtgacacccgcaccttgtcagggggagaaagcttcctggtcagctta
gctctggctttggcgctatcagatctggtcagccataaaaccagtattgattcactcttt
ctcgatgaaggcttcggtaccttggatgcggagacactggatacggcactggatgccctg
gatagcctgaatgcatcgggtaaaaccattggcgttattagtcatgtcgaggcgatgaaa
gacagaatcccagtgcaaattaaagtgaaaaaagtcaacggattgggtgttagccgctta
gataacattttccgagtcaatcaagactaa
DBGET
integrated database retrieval system
