Yersinia enterocolitica subsp. palearctica Y11 (serotype 0 3): Y11_34941
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Entry
Y11_34941 CDS
T02010
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
yey
Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3)
Pathway
yey03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
yey00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Y11_34941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yey03021
]
Y11_34941
03400 DNA repair and recombination proteins [BR:
yey03400
]
Y11_34941
Enzymes [BR:
yey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Y11_34941
Transcription machinery [BR:
yey03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Y11_34941
DNA repair and recombination proteins [BR:
yey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Y11_34941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Cas_Cas2CT1978
Motif
Other DBs
NCBI-ProteinID:
CBY29036
UniProt:
A0A0H3P0U7
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All DBs
Position
3619480..3623508
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNFTTAQILDLFFEKVVFEIRDNKLQME
LVPERLRGETASFDIEANGKVYVEKARRITARHIRQLEKDGIDRIEVPVEYIAGKVVAKD
YIDENTGELICAANMELSLDLLAKLSQAGHKQIETLFTNDLDHGAYISETLRVDPTSDRL
SALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKEDITEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVRDGVVT
DEINYLSAIEEGNFVIAQANSNLDEDGRFIEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTSVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVNLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
TEELQILEAGLFARIHAVLVSGGIEADKLSKLPRDRWLELGLTDEDKQNQLEQLAEQYDE
MKSEFEKKMDAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGEKINAMLKKQEEVAK
LREFIQKAYDLGDNVCQKVDLSTFTDDEVLRLAENLKKGMPIATPVFDGATEKEIKELLQ
LGGLPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMP
ESFNVLLKEIRSLGINIELEEE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttttggacataccttatctcctttctatccaacttgactcgttccagaaatttatcgag
caagatcctgaagggcagtacggcctggaagcagcattccgttctgtttttccaatccag
agctacagcggcaattcggagctgcaatacgttagctaccgtcttggtgagccagtattt
gacgtcaaagagtgccagatccgtggtgtgacttattccgcaccgctgcgcgtaaaactg
cgcctggtcatctatgagcgcgaagccccggaaggtacggtcaaagacatcaaagaacaa
gaagtctacatgggtgaaattccactcatgaccgaaaacggtacctttgtcattaatggt
actgagagggttatcgtatctcagctgcatcgtagtcctggcgtattctttgacagcgat
aagggtaaaacccattcatcgggtaaagtgctgtataacgcacgtatcatcccttaccgc
ggttcatggttagatttcgagtttgacccgaaagacaacctgtttgtccgtattgaccgt
cgtcgtaagttgccggcaaccatcattctgcgtgcattgaatttcaccactgcacagatc
ttggatctgttctttgaaaaagtggtttttgagattcgtgacaacaagctgcagatggaa
ttggttcctgagcgcctgcgcggtgaaacggcatcctttgatattgaagcgaatggcaaa
gtttacgtcgagaaagcgcgtcgtattactgctcgccatattcgccagcttgaaaaagac
ggcattgatcgcatcgaagttccggttgaatacattgccggtaaagtggtcgcgaaagac
tacatcgatgagaacactggtgagcttatctgtgcagccaacatggagctgtcactggat
ttgctggctaaactgagccaggccggtcacaagcaaatcgaaacattgttcaccaacgac
ctggatcacggtgcttatatctccgagaccctgcgtgttgacccaaccagcgatcgtctg
agcgctttggttgagatttaccgcatgatgcgtcctggtgagccaccaacacgtgaagca
gctgaaaacctgtttgagaacctgttcttctctgaagaccgctatgatttgtcagcggtt
ggccggatgaagttcaaccgttcactgctgcgcgacgagatcgaaggttccggtatcctg
agcaaagaagacatcactgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggatgatattgaccacttaggcaaccgtcgtattcgttccgttggtgaaatggct
gaaaaccagttccgtgttggtctggttcgtgttgagcgtgcagttaaagagcgtttgtct
ctgggcgacctcgacacactgatgcctcaggacatgatcaacgccaagcctatttcggct
gcggtgaaagagttctttggttccagccagttgtcacaatttatggaccagaacaacccg
ttgtctgagattacgcataaacgccgtatctctgcattgggcccgggtggtttgacccgt
gaacgtgctggctttgaagttcgagacgtacacccgactcactacggtcgcgtatgtcca
atcgaaacgccagaaggtccaaacatcggtctgatcaactccttgtccgtgtacgcacag
accaacgagtatggtttcctggaaaccccttatcgtcgcgtgcgcgatggtgtggtgacc
gatgaaattaactatctgtctgctattgaagaaggcaacttcgttatcgctcaggcgaac
tccaacctggacgaagacggccgcttcatcgaagacttggtcacttgtcgtagcaaaggc
gaatcaagcctgttcagccgcgatcaagttgactacatggacgtttccactcaacaggtg
gtgtccgttggtgcttctctgattccattcctggaacacgatgacgccaaccgcgccttg
atgggtgcgaacatgcaacgtcaggcagttcctactctgcgtgctgataagccgttggtg
ggtactggtatggaacgtgcggtagcggttgactcaggggtaacctctgtagccaaacgt
ggcggtaccgttcagtacgtagatgcatcccgtatcgtgattaaagttaacgaagacgag
atgtacccaggcgaagcaggtattgatatttataacctgaccaaatacacccgttctaac
cagaacacctgtatcaaccagatgccgtgtgtgaatctgggtgagccaatcgagcgcggt
gacgtgctggcagatggcccatctacagaccttggcgaactggcattgggtcagaacatg
cgtgtagcgttcatgccttggaacggttacaacttcgaagactccatcttggtctccgag
cgcgtggtgcaagaagatcgcttcacaactatccacattcaggaactggcatgtgtgtct
cgtgacaccaagctggggccagaagagatcactgctgacatcccgaacgtgggtgaagct
gcactctccaaactggatgaatccggtatcgtgtatatcggtgctgaagtgactggcggc
gacattctggttggtaaggtaacacctaaaggtgaaacccaactgaccccagaagagaag
ctgttacgtgcgatcttcggtgagaaagcgtctgatgttaaagactcttctctgcgtgtt
ccaaacggtgtttccggtacggttatcgatgtacaagtctttactcgcgacggcgtagaa
aaagacaaacgtgcattggaaatcgaagagatgcaactgaagcaggctaagaaagacctg
acggaagagttgcagatcctggaagccggcctgtttgcacgtatccatgcagtactggtt
tctggtggcatcgaagctgacaagctgagcaaattaccacgtgaccgttggctggaactg
ggtctgactgacgaagacaagcaaaaccaactggaacagttggcagagcagtacgacgaa
atgaaatccgaattcgagaagaagatggatgccaagcgtcgtaagatcacccaaggtgat
gatttagcaccaggtgtgctgaagatagtcaaagtgtatctggccgttaaacgtcagatt
caaccgggtgacaagatggccggtcgtcacggtaacaaaggtgttatctctaagattaac
ccgatcgaagatatgccttacgatgaaaacggtacgccggtagacatcgttctgaacccg
ctgggcgtaccatcgcgtatgaacatcggtcagattttggaaacccacttagggatggca
gcgaaaggtatcggcgagaaaatcaacgccatgctgaaaaagcaggaagaagttgccaaa
ctgcgtgagtttatccagaaagcctacgatctgggcgataacgtttgtcagaaagttgat
ctgagcaccttcaccgatgacgaagtcctgcgtctggctgagaacctgaaaaaaggtatg
ccaatcgcaacaccagtcttcgatggtgcgacagagaaagaaatcaaggaactgttacag
ctgggtggcttgccaacttctggtcagattactctgtttgacggccgtaccggcgagcaa
ttcgaacgtcaggttactgtcggctacatgtacatgctgaaactgaaccacttggttgat
gacaagatgcatgcgcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggctcagttcggtggtcagcgcttcggtgagatggaagtgtgggcgttggaagct
tatggcgccgcgtacacattgcaggaaatgcttaccgtcaagtccgacgatgtaaacggc
cgtaccaagatgtacaaaaacatcgtggatggcgatcaccgtatggaaccaggcatgccg
gagtccttcaacgtattgttgaaagaaatccgctcgctgggcatcaatatcgagctggaa
gaagagtaa
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