Yersinia enterocolitica subsp. palearctica Y11 (serotype 0 3): Y11_38671
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Entry
Y11_38671 CDS
T02010
Name
(GenBank) RNA polymerase associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
yey
Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3)
Brite
KEGG Orthology (KO) [BR:
yey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yey03021
]
Y11_38671
Transcription machinery [BR:
yey03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Y11_38671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
CBY28663
UniProt:
A0A0H3NVQ2
LinkDB
All DBs
Position
complement(4033608..4036514)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAIDVRMVTLLFPATGENRLYARNDSPITRVMFNPGDT
ITHHEGWQLKVEEVSEENGLITYIGTRLDTEETGVSMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQFRLPWSGLRGIRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLSGRAERILIVVPESLQHQWLVEMLRRFNLRFSLFDDSRYSEALL
DSTNPFETEQMVICSLDFVRRNKQRLEQLADASWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPDRFHDYEEFINEQQKYRPIADAVTLLL
GGERLTDDKLNLLGELINEQDIEPLLKAANSQTEDSEAARQELVTMLMDRHGTSRILFRN
TRNGVKGFPHRVLHQIKLPLPTQYQTAIKVSGIMGTKKSLEARAKDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLNYLIANRNEKVLVICAQAATALQLEQVLREREAIRAAVFHEGLSL
IERDRAAAYFASEEDGAQVLLCSEIGSEGRNFQFACQLVMFDLPFNPDLLEQRIGRLDRI
GQNREIQIMVPYLENTAQAVLVRWYHEGLDAFEHTCPTGRTIYDSGYQELITYLATPSEQ
EGLDEFIHTCRQQHEGLKLQLEQGRDRLLEMHSNGGEHGQELAEIIADQDNDVNLVSFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFDRQQALSREDAQFVSWE
HPIIRNGLDLILSGETGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTP
VRMLMDKNGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQEVHAMLQQAEALVEEQAR
LLIEAARHEADDKLSAELARLEALKAVNPNIRDDEIETLEHNRKMVLENLNQAGWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaacttggattgggt
actgtcgttgccattgacgtacgcatggtcaccttactgtttcccgcaaccggtgaaaac
cgcctttacgccagaaatgattctccaattacccgtgtcatgtttaatccgggcgatacc
atcactcaccacgaaggctggcagctgaaagtggaagaagtgtctgaggagaacgggctg
attacctacattggtactcgcctggatacagaggaaaccggcgtttccatgcgtgaagtt
ttgctcgatagcaaactgacttttagcaaaccgcaagacagattatttgccggccagatc
gatcgcatggatcggtttgccctgcgttttcgcgcccgtaaataccaaagtgagcagttc
cgcctgccctggagtggtttgcgcggcatccgcgccagcttgatcccacaccaattacat
atcgcctatgaagtgggtcaacgccatgcgccacgcgtcttgctggccgatgaagtaggg
ttgggtaaaactatcgaagcggggatgattatccatcagcaactgctgtcaggccgtgct
gaacgtatcctgattgtggtgccggaaagcttgcaacaccagtggttggtcgaaatgctg
cgccgcttcaatctgcgcttctcattgtttgatgacagccgctattctgaagccctgctc
gacagcaccaatccgtttgaaactgaacaaatggtcatttgctcgctggactttgtgcgc
cgtaataaacagcgtctggaacagttggcggatgcgtcctgggatctgctggtggtggat
gaagcacaccatctggcctggagtgaagaagcgccgagccgcgaatatcaagttattgaa
caactggccgagcatatccccggcgtcttgctgctgaccgcaacaccagagcaactgggc
cagcagagccactttgctcgcttgcgtctgcttgatcctgaccgcttccacgattacgaa
gaatttattaatgagcagcaaaaataccgcccaattgccgatgctgtcacattgctgctg
ggtggtgagcgcttaactgacgataagctgaatctgctcggtgagctgattaacgagcag
gatatcgagccactgctgaaagcggcaaacagccaaactgaagatagcgaagcggcacgt
caggagttggtgaccatgctgatggacagacatggcaccagccgtatcttgttccgtaac
acccgtaatggggtgaaaggcttcccacaccgtgtcttgcatcagattaagctgccactg
ccaactcaataccaaacggcaattaaagtgtcaggcattatgggtaccaagaaaagcctc
gaagcacgagccaaagacatgctttatccagagcaaatctaccaagaattcgaaggcgaa
aacgccacttggtggaactttgacccacgggttgaatggctgcttaactacctgattgct
aaccgcaatgagaaagtgctggttatttgtgcacaagccgccaccgcattgcagcttgaa
caagtgctgcgcgaacgcgaagctatccgtgccgcagtattccatgaaggtttatcactg
attgaacgtgaccgcgcggcggcctattttgcctccgaagaagacggcgcacaggtatta
ttgtgttctgaaatcggctctgaagggcgtaacttccagtttgcctgccaactggtgatg
ttcgatttaccttttaatccggacttgcttgagcaacgtattggtcgtctggataggatc
ggccaaaaccgtgaaatccagataatggtgccgtatctggaaaataccgcgcaggcggta
ctggtacgctggtatcacgaaggtttggatgctttcgagcacacctgcccgacgggccgc
actatttatgacagcggttatcaagaattgattacttacctggcaacgccaagtgagcag
gaagggctggatgaatttatccacacctgccgccagcagcatgaagggctgaaactgcaa
ttggaacagggccgtgaccgcttgctggagatgcactccaacggaggcgaacatgggcaa
gaactggcagaaatcattgcggatcaagacaatgacgttaatttagtcagttttgcgctc
aacctgttcgatattgtcgggatcaaccaggaagatcgcagcgacaatttgattgtgctg
acgccatctgaccatatgctggtgccggatttcccaggattaccacaggatggttgcacg
gtgacatttgatcgccaacaggcactatcgcgcgaagatgctcagtttgtcagttgggaa
cacccgatcatccgtaacggtttggatctgatcctctccggtgagaccggaagctgtgcg
gtttctctgttgaaaaacaaagcattgccggtcggtacactgctcgctgaattggtctat
gtggttgaagcgcaagcaccgaaacacttgcaattgacccgcttcttacccccaaccccc
gtacggatgctgatggacaagaacggcaccaatctggcagcacaagtagaatttgaaagc
tttaatcgtcagttgaatgcagtcaatcgccatacctctagcaaactggtcaacgcggtt
cagcaagaagttcacgccatgttgcaacaagcagaagcactcgttgaagaacaggcgcgt
ttgctgattgaagcagccaggcatgaagcggacgataaattaagtgccgagctggcacgt
ttggaagccctgaaagcagttaaccccaatattcgtgatgacgaaatagagactctggaa
cataaccgtaaaatggtgctggaaaacctcaatcaggcgggttggcgtttggatgccatt
cgtctggtggtggtgacacaccagtaa
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