KEGG   Yersinia fenwicki: ACF3VQ_14255
Entry
ACF3VQ_14255      CDS       T11829                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
yfe  Yersinia fenwicki
Pathway
yfe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:yfe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ACF3VQ_14255 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yfe03400]
    ACF3VQ_14255 (uvrB)
DNA repair and recombination proteins [BR:yfe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ACF3VQ_14255 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ACF3VQ_14255 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD UB2H AAA_30 DUF87 AAA_22 SBDS_domain_II
Other DBs
NCBI-ProteinID: XIA58436
LinkDB
Position
complement(3122438..3124450)
AA seq 670 aa
MSKSFKLHSEFKPAGDQPEAIRKLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLSELQ
YSRNDQVFQRGTFRVRGEVIDIFPAESDEWALRVELFDEEVERLSIFDPLTGQLQHEVPR
FTVYPKTHYVTPRERILQAMEDIKVELAERRKVLLANNKLIEEQRITQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPSDGLLIVDESHVTIPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFEALAPQTIYVSATPGKYELEKSGGDVIDQVVRPTGLLD
PLIEVRPVATQVDDLLSEIRIRAAINERVLVTTLTKRMAEDLTEYLIEHGARVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDRITASMEKAIGETERRRAKQQAYNEERGIIPQGLNKKIGDILQLG
QPSTRGKGKGRGGKVADTNNYQSLAPKALDQKIRELEAKMYIHAQNLEFEQAAELRDQVH
QLRQQFIAIS
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgagtaaatcattcaaactacattctgagtttaagccagcaggtgatcagcctgaggcc
atccggaaactggaggaggggctggaaaatggtctggctcatcagacgctgttgggggta
accggctcgggcaaaacctttacggtagccaatgttattgctgacctgaatcggcccacc
atggtgttagcgcccaataagaccttggccgcacagctttatggtgagatgaaagagttc
tttcccgagaatgcggtggaatattttgtctcctattatgactattatcaacccgaagct
tatgtaccaagttcagacacctttatcgagaaagacgcctcggtaaacgaacatatcgaa
caaatgcggctatcagccaccaaggcattgctggagcggcgcgacgtgatagtggtcgcc
tcggtctctgccatttatggtctgggtgatcctgatttatacctgaaaatgatgctgcat
ttgaccaaaggtatgataatcgaccaacgctctattttgcggcgcttatcagaattgcaa
tacagtcgcaacgaccaggtgtttcagcgcggcactttccgggtacgtggcgaggttatc
gatatcttcccggcagagtctgatgaatgggcactgcgcgtagagttgtttgatgaggaa
gtggagcggctgtctatatttgatccactaaccggccagctacaacatgaggttccacgt
tttactgtttatcctaaaacgcactacgttactccacgggagcgtattttacaggcgatg
gaagacatcaaggttgagctcgctgagcggcgtaaggtactgctagctaacaacaaattg
attgaagaacagcgtattacccagcgaacccaatttgacctcgaaatgatgaatgagctg
ggttattgctccggtatagaaaactattcccgctatctttcggggcgtgggccgggagag
ccgccaccaacgctattcgattatctgccatcagatggtttgctgattgtcgatgaatcc
cacgttaccatcccgcaaatcggcggtatgtacaaaggtgaccgctcacgtaaagaaaca
ttggtggagtatggcttccggctaccctcagcgctggataaccgcccaatgcgttttgaa
gagttcgaagcgctggcaccacaaactatctatgtttcggccactcccggtaaatatgag
ctggaaaaatccggcggtgatgttatcgatcaagtagtgcgtccaaccggcttgctggat
ccattgattgaggtgcggcctgtagcaacgcaggtggatgacttgctatcagagatccgc
attcgcgctgcgattaatgagcgggtgctggtcactacactgaccaaacgcatggctgag
gacttaaccgagtatctgatagagcatggcgcgcgggtgcgttacctgcattcggatatt
gataccgtggaacgcgtagagattatccgtgatttgcgtttgggtgagtttgatgtgctg
gtggggatcaacttattacgagaaggactagatatgccggaggtttctctcgtcgccatc
cttgatgctgataaagaaggtttcctgcgctctgagcgctccttgatccagaccattggc
cgtgcagcacgtaaccttaatggtaaagccattctttatggtgacagaattacggcttca
atggaaaaagccattggtgaaacagagcgacgccgagccaaacagcaagcttacaatgaa
gagcgcggtattatcccacaagggctaaacaagaagatcggcgatattctgcaattgggt
caaccctctacccgtggcaaagggaagggacggggtggcaaagttgctgataccaacaac
taccaatctctggcaccaaaagcacttgatcagaaaatccgtgaattggaagcgaagatg
tacatccacgcgcaaaatcttgagtttgagcaggcggcagaattacgcgatcaggtgcac
cagttacgccagcagttcatcgctatatcttaa

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