Yersinia fenwicki: ACF3VQ_18485
Help
Entry
ACF3VQ_18485 CDS
T11829
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
yfe Yersinia fenwicki
Pathway
yfe00330
Arginine and proline metabolism
yfe00480
Glutathione metabolism
yfe01100
Metabolic pathways
yfe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yfe00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
ACF3VQ_18485 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
ACF3VQ_18485 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
ACF3VQ_18485 (speF)
Enzymes [BR:
yfe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
ACF3VQ_18485 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
XIA61857
LinkDB
All DBs
Position
4085176..4087341
Genome browser
AA seq
721 aa
AA seq
DB search
MKKLNIAASTSAIPCFESQREVVDVLHTDFTDIAAVVLSVQDINNGVIESIHSLGLDIPI
FAAVCCEEELNTDVLPSLNGVFELCGDNTDFYGKQLESAAEKYEKELLPPFFSTLKKYVE
MGNSTFACPGHQGGQFFRKHPAGRQFFDFYGETIFRSDMCNADVKLGDLLIHEGAPCDAQ
KHAAKVFNADKTYFVLNGTSASNKVATNALLARGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFEEKYLREQIRSVAPERANEARPFRLAIIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQDRYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGKSGQRM
WLDCVKTGIEARKMILNTCNMIKPFVPVEVDGKPWQEYDTEAMAQDLRFFNFIPGEKWHA
FEGYEASQYFVDPCKLLLTTPGIDTNTGEYTASGIPATILANFLRENGIVPEKCDLNSIL
FLLTPAEDLAKMQHLVAQIARFERFIEEDALLSDVLPTVYRNNETRYKGYTIGKLCQEMH
DLYVSYDVKQLQKEMFRKQYFPKVMMNPQDANIEFVRGHAELVPLCKAEGRIAAEGALPY
PPGVLCVVPGEVWGGAAQRYFLALEESINLLPGFAPELQGVYLQVDEDGWNRAYGYMMKN
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaaatatcgcggcgagcacatctgccatcccttgtttcgaatcacaacgt
gaagtggtggatgttttacataccgattttactgatatagctgctgtggtgctttctgtt
caagacattaataatggtgttattgaaagcattcattcattaggtctggatattcctatt
tttgcggctgtttgttgtgaagaagagctgaataccgatgtattaccgtctttaaatgga
gtatttgaactgtgcggtgataatactgacttttacggtaaacaactggagtccgcagct
gaaaaatatgaaaaagagttgctacctccgttcttcagtacattaaaaaaatatgttgag
atggggaattctacttttgcctgtccaggacaccaaggtggtcaattcttccgtaaacat
ccggctggacgtcaattctttgacttctacggtgagactattttccgttctgatatgtgt
aatgctgacgtcaagttaggcgatttgcttattcatgaaggcgcaccttgtgatgctcaa
aaacatgctgcaaaagtatttaatgccgataaaacctatttcgtactgaacggaacatca
gcttctaataaagttgccaccaatgccctattagcccgtggtgatctggtcctgtttgac
cgtaataaccataaatccaaccaccacggcgcactgattcaagcaggggctacaccagtt
tatctggaaactgcccgtaacccgtttggctttatcggtggtattgatgctcattgtttt
gaagagaaatacctgcgtgaacaaatacgtagcgtcgccccggagcgtgccaacgaagcg
cgtccattccgcctggcaattatccaattaggcacttatgacggcaccatttataacgct
cgtcaggttgtggataaaatcggccacctttgtgactatattctgttcgactctgcttgg
gtgggttatgagcagtttattcctatgatgaaagattgctcaccactattacttgaactg
aatgaaaacgatcccggtattatcgttacgcaatcagtacataaacaacaagctgggttc
tcgcaaacctcgcaaattcataagaaagataaacatattaaaggccaggatcgttattgt
aaccataaacgttttaataatgcctttatgttgcacgcttccaccagtccattctatcca
ttattcgcagcattagatgttaatgcgaaaatgcatgaagggaaaagtggtcagcgcatg
tggttagattgtgtgaagaccggtattgaagcccgtaaaatgatcttaaatacctgtaat
atgattaaaccttttgtgccggtagaagttgatggtaaaccttggcaagaatatgacacc
gaggctatggctcaagatttacgcttctttaattttattccaggcgaaaaatggcatgct
tttgaaggttatgaagcatcacaatactttgtcgacccttgtaaattgttattaactaca
ccaggcattgataccaataccggcgaatataccgcttcaggtattccggccactattctg
gctaacttcctgcgtgaaaatggcatcgtgccagaaaaatgcgaccttaactctattctg
ttcttattaacgccagcagaagacttggcaaaaatgcaacatttggtggcgcaaattgct
cgctttgaacgtttcattgaagaagatgcattgctgagtgatgtattaccaacagtttat
cgtaataacgaaactcgttataaaggctataccatcggtaaattatgtcaggaaatgcat
gacctttatgtcagctacgatgttaaacagctgcaaaaagaaatgttccgcaaacaatat
ttccctaaagtcatgatgaatcctcaggatgccaatattgaattcgttcgtggacatgct
gaattagttccattatgtaaagcagaaggccgaattgccgctgaaggcgcacttccttac
ccaccgggagtattgtgtgttgtccctggtgaagtttgggggggggctgctcaacgttat
ttcctggcacttgaagaaagcattaacttattgccaggttttgcacctgaattacaaggt
gtttatttacaagtcgatgaagacggatggaaccgcgcatacggctacatgatgaaaaac
aagtaa
DBGET
integrated database retrieval system
