Yersinia fenwicki: ACF3VQ_20190
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Entry
ACF3VQ_20190 CDS
T11829
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
yfe Yersinia fenwicki
Pathway
yfe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACF3VQ_20190 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yfe03021
]
ACF3VQ_20190 (rho)
03019 Messenger RNA biogenesis [BR:
yfe03019
]
ACF3VQ_20190 (rho)
Transcription machinery [BR:
yfe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACF3VQ_20190 (rho)
Messenger RNA biogenesis [BR:
yfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACF3VQ_20190 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
XIA59475
LinkDB
All DBs
Position
complement(4452165..4453424)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSDLITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTVAGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIATSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDF
NRSGTRKEELLTTTEELQKMWILRRILHPMGEIDAMEFLISKLATAKTNDQFFDNMRRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaacacgccggtttctgatctgataacacttggcgaaaat
atggggctggaaaacctggcccggatgcgtaaacaagatattattttctctatccttaag
cagcacgcgaaaagtggagaagatatcttcggtgacggtgtgttggagatattgcaagat
ggatttggtttcctccgttctgcagacagctcctacctcgccggtcctgacgacatctac
gtatccccaagccaaattcgccgtttcaacctccgcactggtgacaccgttgccggtaag
attcgtccacctaaagaaggtgagcgttactttgccttgttgaaagttaacgaagttaac
tatgacaaaccggaaaatgctcgtaacaaaatcctcttcgaaaacttaactccattacat
gccaactctcgtctgcgcatggaacgtggtaacggttcgactgaagatttaactgctcgc
gtccttgatttggcatcgccaatcggtcgtggtcagcgtgggctgattgttgctccgcca
aaagcgggtaaaaccatgctgttgcagaatattgctaccagcattgcctacaatcaccct
gattgcgtattgatggtactgctgattgacgagcgcccagaagaagtgaccgagatgcaa
cgtctggttaaaggtgaagttattgcttccaccttcgacgagccagcatctcgccacgtt
caagtcgctgaaatggttatcgagaaagctaagcgcctggttgagcataaaaaagacgtt
atcatcttactggattccattacccgtttggcccgcgcatataacaccgtggtacccgct
tccggtaaagtgctgactggtggtgtggatgctaacgccttacatcgtccaaaacgcttc
tttggtgccgcacgtaatgttgaagagggcggtagcctgactatcattgccaccgctttg
gttgataccggttctaaaatggatgaagttatctatgaagaatttaaaggtaccggtaac
atggaactacatttgtcgcgcaaaattgcagagaaacgtgtgttcccagccattgatttc
aaccgctctggtacgcgtaaagaagagctgctgacaaccaccgaagagttgcagaaaatg
tggattttacgtcgtatcctacatccaatgggtgagatcgatgcaatggagttcctcatc
agcaaattggcaacagcgaaaaccaacgatcagttcttcgataacatgagacgttcgtag
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