Yersinia fenwicki: ACF3VQ_20540
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Entry
ACF3VQ_20540 CDS
T11829
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
yfe Yersinia fenwicki
Pathway
yfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACF3VQ_20540 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yfe03400
]
ACF3VQ_20540 (priA)
Enzymes [BR:
yfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACF3VQ_20540 (priA)
DNA repair and recombination proteins [BR:
yfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACF3VQ_20540 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WHD_PriA
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_22
AAA_19
TrwB_AAD_bind
WHD_PriA_bact
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
XIA59528
LinkDB
All DBs
Position
4533850..4536048
Genome browser
AA seq
732 aa
AA seq
DB search
MPVVQVALPVPLARTFDYRLDSATPCPVVGARVSVPFGKRNAIGMVVGISETSTFPLEQL
KAIDAVLDGDSLFPPSLWRILCWATEYYHYPIGEVLFHALPILLRQGKPAQSAPLWQWFA
TEQGRATPPESLKRAPKQQQALAALLQKPVYRHQVNEMALTESALQALRSKGLIDLRAQE
VATTDWRDGFSVLGERLRLNTEQATAVGAIRSEDTQFAAWLLAGVTGSGKTEVYLSVLEN
ILAQGRQALVLVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSVWLRARNGEAAIV
IGTRSALFTPFSRLGVIIIDEEHDSSYKQQEGWRYHARDLAVFRAREEGIPIVMGTATPA
LETLHNVQMGKYRQLTLTKRAGNAKPAVQHLLDLKGLPLKVGLSQPLLKRMKTHLQADNQ
VILFLNRRGYAPALLCHECGWIAECQRCDHYYTLHQNYRQLRCHHCDSQRPVPQQCPKCG
STHLVSVGVGTEQLENELAPLFPDTPITRIDRDTTSRKGSLEQHLADVHQGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVILQTHH
PEHPLLQILLQQGYDAFAKQALAERKSVFLPPYTSHIIVRSEDHDNQQAALFLQQLRNLL
EASPLKDDALWIMGPVPALQAKRGGRFRWQLLLQHPSRQLLQRLIKTSQPLINTLPQARK
VKWTLDVDPIDS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgttcaagtggcgttacccgttccactggcccgcacctttgactaccgcctt
gacagtgccacgccctgcccggtagtgggggctcgcgtcagtgtgccatttggtaaacgt
aatgccattggaatggtagtgggtatcagcgaaaccagtacattccccctcgaacagctt
aaagctattgatgcggtgttggacggcgacagcttattcccacccagcctgtggcgcatt
ctttgttgggcgaccgagtactatcattacccgataggcgaagtgctgtttcatgcgtta
ccaattttattgcgccaggggaagcctgcgcaatctgcccccttgtggcaatggtttgcc
accgaacaaggcagggccactccgccagaaagcttaaaacgcgcaccgaagcaacaacaa
gcccttgcggcgttattacaaaagccggtttatcgccatcaagttaatgaaatggcatta
acggaaagtgcgctgcaagcattgcgtagcaaagggctaattgacctgcgggcacaagaa
gtagcaaccacagactggcgcgacggtttttccgtattaggcgaacgcttgcggctcaat
actgagcaagccaccgctgtcggggcgattcgcagtgaagatactcagtttgccgcctgg
ttgctggccggggtgactggctcgggtaaaaccgaagtttatctcagtgtgctggaaaat
attctggcgcagggccgccaggcgctggttttggttcctgaaattggcctaacaccgcaa
actatcgcccgttttcgcgaacgattcaatgcgccggttgaagtgctccattctggttta
aacgacagcgagcgcttatccgtctggctacgagcccgtaacggcgaagccgccattgta
ataggaactcgctccgcgctgttcacgccattctcccgtctcggcgtcatcattattgat
gaagagcatgatagctcctataaacagcaagaaggctggcgttaccatgcccgcgattta
gcggtattccgtgcgcgcgaagaaggcattcccatcgtgatggggacggcaacccccgcg
ctggaaaccttacataatgtacaaatgggtaaatatcgccagttaaccctgacgaaacgc
gccggtaatgctaaaccggcagtgcagcacttgttagatctcaaagggttgccgctcaaa
gtcggcctttctcagccgctgctaaaacggatgaaaacccatttgcaggccgacaatcag
gtgattctgttcctcaaccgccggggttatgcgcctgcgctgctgtgccatgagtgtggt
tggattgctgaatgtcagcgctgtgaccactattacaccctgcatcagaattaccgccaa
ttacgctgccaccactgcgacagccagcgcccagtgccacagcagtgccctaaatgcggc
tcaacacatctggtgtcagtcggtgtcggtactgaacagttggaaaatgagctggctcct
ctgttcccagacacgccgatcacccgaattgaccgtgataccaccagccgcaaaggctcg
ctggaacagcatctggctgatgtacatcaaggaggggcgcgaatattgattggcacccaa
atgctggcgaaaggccatcacttccccgatgtgactctggtggcattgctggatgtcgat
ggtgcattattctcggcagatttccgttcggcggagcgctttgcgcagctctacacgcaa
gtatcaggccgtgctggccgtgcaggtaagcaaggcgaggtcatcttacaaacccatcac
cctgagcatccattgctgcaaatcctgctgcaacagggctacgatgcctttgccaaacaa
gctctggcagagcgcaaaagcgtatttttacccccctataccagccatattatcgtgcgc
agcgaagatcacgataaccagcaagcggcactgtttttgcaacaattacgtaatttactg
gaagccagcccgcttaaagatgatgcattatggattatggggccggttccggcattacag
gcgaaacgaggtgggcgcttccgctggcaattattattacaacacccctcgcggcaatta
ctgcaacgactgattaaaacatctcagcccctcatcaatactttgccgcaagcgcggaaa
gttaagtggacattggatgttgatcccatagatagctaa
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