Yersinia frederiksenii: AW19_1041
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Entry
AW19_1041 CDS
T03606
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AW19_1041 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yfr03400
]
AW19_1041 (ruvB)
Enzymes [BR:
yfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AW19_1041 (ruvB)
DNA repair and recombination proteins [BR:
yfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AW19_1041 (ruvB)
RecFOR pathway proteins
AW19_1041 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_22
AAA_3
nSTAND3
AAA_16
Mg_chelatase
AAA_14
AAA_18
AAA_2
Sigma54_activat
Rad17
AAA_28
RNA_helicase
AAA_17
NTPase_1
AAA_24
Bac_DnaA
NB-ARC
TsaE
ABC_tran
AAA_33
Sigma54_activ_2
NPHP3_N
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AJI85553
LinkDB
All DBs
Position
1108386..1109390
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLISAGVISDEESIDRAIRPKLLAEYVGQPHVREQMEIFIQAAKQRGDALDHVLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTAPLRDRFGIVQR
LEFYQVADLEHIVTRSAKYLGLELTPDGAHQLARRSRGTPRITNRLLRRVRDFAEVRADG
AINGDVAMKALDMLNVDAEGFDFMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFIQRTPRGRIATNHAYKHFGIIRAE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagaccgcctgatctctgcgggtgttatcagtgatgaagagagtattgat
agggctatccgcccgaagctgttggcagaatatgtcgggcagccccatgtccgcgagcaa
atggaaatcttcattcaggcggcgaaacagcgcggtgatgcgctggatcatgtgctgata
tttggccctccgggactgggaaaaaccacattggcaaatattgttgctaatgaaatgggg
gtgaatctgcgtaccacctctggcccggtattggaaaaagcgggcgacttggctgctatg
ctgaccaatcttgagccgcacgacgtattattcattgatgaaatccatcgtttatcaccc
gtggttgaagaaatcctctatccggccatggaagattatcaactggatatcatgattgga
gaaggcccggcggcgcgctcaatcaaactcgatttacccccatttaccttgattggcgcg
acgacccgtgcggggtcattaactgcaccgttgcgtgatcgatttggtattgtgcagcgc
cttgagttttatcaagttgctgatttagaacatatcgtcacccgcagtgccaaatatttg
gggctggaactcactcctgacggggcacatcaattagcccgtcgctcccgagggacaccg
cgcatcaccaaccgcttgttacggcgcgtgcgtgatttcgctgaggtcagggccgatggc
gctatcaacggcgatgtggcgatgaaagcgctggatatgctgaatgtcgacgccgaaggt
tttgattttatggaccgcaaactcttgctggctgttatcgataaatttatgggcggccca
gtggggttggataacttggcggcggcaattggtgaggagcgggaaaccattgaagacgtg
ctggagccgtatttaatccaacaaggctttatccagcggaccccccgtgggcgcattgcc
accaatcatgcttataaacattttggtatcatccgcgcagagtaa
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