Yersinia frederiksenii: AW19_1046
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Entry
AW19_1046 CDS
T03606
Name
(GenBank) lysM domain protein
KO
K19304
murein DD-endopeptidase [EC:3.4.24.-]
Organism
yfr
Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yfr01002
]
AW19_1046
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yfr01011
]
AW19_1046
Peptidases and inhibitors [BR:
yfr01002
]
Metallo peptidases
Family M23
AW19_1046
Peptidoglycan biosynthesis and degradation proteins [BR:
yfr01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
AW19_1046
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Csd3_N2
Peptidase_M23
OapA_N
NMB0315_dom_I
LysM_OapA
LysM
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AJI87165
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Position
1113784..1115100
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AA seq
438 aa
AA seq
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MQQIVRTITLAYNNLPRPHRIMLGSLTVMTLAVAVWRPFVYHSEHEPVAKSVVLDTSQSR
VLLPEASEPIDQPTPDDEIPQDELDAKDVSESGVHEYVVSTGDTLSTILTQYGIDISDVS
LLATQNRDLRNLKIGQQISWTVNDTGDLQRLTWEVSRRETRTYDRVGNNFKETKELQKGE
WTNAVLTGRLDGSFVTSAKKAGLTGAEIRAVTKALQWQLDFAKLRKGDQFSVLMSREILD
GRSEQSQLVGVRMRSGGKDYYAIRADDGKFYDRLGSGLARGFMRFPTMKQFRVSSNFNPR
RINPVTGRIAPHKGVDFAMPVGTPVLAVGDGEVVIAKRSGAAGNYVAIRHGRQYTTRYMH
LKKLLVKPGQKVKRGDRIALSGNTGRSTGPHLHYEFWMNQQAVNPLTAKLPRSEGLSGKD
RSDYLAIAKQVIPQLQLD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcagatagtccgaactatcactttggcgtataacaatctccctcgaccccaccgc
attatgctggggtcgttgactgtaatgacactggccgtagctgtttggcggccttttgtt
tatcattcggagcacgaacctgttgctaaaagtgttgtattagataccagccaaagccgt
gttttactccccgaagccagtgagcctattgatcagccaacccctgatgatgaaatccca
caagacgaattagatgctaaagatgtcagtgaaagtggtgttcatgagtacgtggtctcg
accggcgatacccttagtaccattctgacccaatatggcattgatatctccgatgtttcg
ctgttggcaactcaaaatcgtgatttgcgaaatctgaaaatcgggcaacaaatctcttgg
acagtcaacgacaccggtgatttgcagcgcctgacatgggaggtttctcgtcgtgaaacc
cgcacctatgaccgtgtaggtaataatttcaaagaaacaaaagagttacagaaaggcgag
tggaccaatgcggttctcaccggtcggctcgacggtagttttgttaccagtgccaaaaaa
gccggtttgacgggcgcagagattcgcgctgtgacaaaagcattacaatggcagttggat
tttgccaaactgcgtaaaggtgatcagttctcggtgttgatgtcccgtgaaatacttgat
ggccgcagtgagcaaagccaactggttggggtgcgtatgcgttctggcggtaaagattat
tacgccatccgtgccgatgacggtaagttctatgaccggcttggttctggtttggcgcgt
ggttttatgcgttttcctaccatgaagcaattccgggtctcgtctaactttaatcctcgc
cgcattaacccggtaaccgggcgcattgcaccgcataaaggggtggattttgcgatgcca
gtgggtaccccagtgcttgctgtcggtgatggcgaagtggttattgctaaacgtagcggg
gctgcgggtaactatgtggctattcgtcatggccgccaatacaccacccgttacatgcat
ttgaaaaaattactggtgaaaccaggccaaaaagtgaaacgtggtgatcgtattgccttg
tcgggtaacaccggccgctccacaggcccgcatctgcattatgaattctggatgaaccag
caagccgttaacccattgaccgctaagttaccgcgttcagaagggctgagcggcaaagac
cgcagtgactatctggctattgcgaagcaggtcattccgcagctgcaactggattaa
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