Yersinia frederiksenii: AW19_1058
Help
Entry
AW19_1058 CDS
T03606
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr00061
Fatty acid biosynthesis
yfr00071
Fatty acid degradation
yfr01100
Metabolic pathways
yfr01212
Fatty acid metabolism
yfr02024
Quorum sensing
yfr04146
Peroxisome
Module
yfr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AW19_1058 (fadD)
00071 Fatty acid degradation
AW19_1058 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AW19_1058 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
AW19_1058 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
yfr01004
]
AW19_1058 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yfr04147
]
AW19_1058 (fadD)
Enzymes [BR:
yfr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AW19_1058 (fadD)
Lipid biosynthesis proteins [BR:
yfr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AW19_1058 (fadD)
Exosome [BR:
yfr04147
]
Exosomal proteins
Exosomal proteins of breast milk
AW19_1058 (fadD)
Exosomal proteins of breast cancer cells
AW19_1058 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AJI87918
LinkDB
All DBs
Position
1127394..1129088
Genome browser
AA seq
564 aa
AA seq
DB search
MEKVWLKRYPADVPAEIDPDRYSSLVEMFENAALRYADQPAFINMGEVMTFRKLEERSRA
FAAYLQQGLGLQKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELEHQLNDS
GAVAIVIVSNFAHTLEKIVFKTQVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYYL
PDAISFRTALQKGRRMQYVKPDVINTDMAFLQYTGGTTGVAKGAMLTHRNMQSNLEQAKA
AYAPLLQPGHELVVTALPLYHIFALTMNCLLFIELGGRSLLITNPRDIPGMVKELSRYPF
TAMTGVNTLFNALLNNEEFTQLDFSTLRLSVGGGMPVQKAVAEKWENLTGKHLLEGYGLT
ECSPLVTGNPYDLKHYSGSIGLPVPSTDVRLVDDEGNDVALGEPGELWVRGPQVMLGYWQ
RPEATDEVLKQGWLATGDIATIDEQGFLRIVDRKKDMILVSGFNVYPNEIEDVVALHAKV
LESAVVGVPNEVSGETVKLFVVKKDVSLTQEELLTHCRRYLTGYKVPKIVEFRDELPKSN
VGKILRRELRDEQIKAKVSEQNAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaagtatggctaaagcgatacccggcagatgtccccgcagaaattgacccggat
cgctattcttctttggtggaaatgtttgagaatgccgcgttgcgttatgcggaccaacct
gcgttcatcaatatgggggaggtgatgaccttccgtaagctggaagagcgtagccgtgct
ttcgccgcctatctacagcaaggtctgggattgcaaaaaggcgatcgcgttgcattgatg
atgcctaacctgctgcaatatcctattgctttgtttggtattctgcgtgctggcatggtt
gtggtgaatgttaatccactgtataccccacgagagctagagcatcagctcaatgatagt
ggcgctgtggctattgttattgtttccaattttgcccatacactggaaaaaatcgtgttt
aagacccaagttaagcacgttattttaacgcgtatgggcgatcagctgtcgacggcaaaa
gggacactggtcaatttcgtggtgaaatatatcaagcggctggtgccgaaatactatttg
cctgatgccatttcattccgcacggcattacagaaaggccgccggatgcaatatgtgaag
ccggatgtcatcaatacagatatggcattcttgcaatataccggcggtacaactggcgtg
gcgaaaggggcgatgttgacccaccgtaacatgcaatcgaacctggaacaggccaaagcg
gcctatgccccattgttacaaccgggccatgagctggtggtgacggcgctaccgctctat
cacatttttgcgttgaccatgaattgcctactattcatagaactgggcggccgcagttta
ttgataactaacccgcgtgatataccgggcatggtgaaagagcttagtcgctacccattc
acggcgatgaccggggtgaacacattatttaatgcgctgttaaataatgaggaattcacc
caattagacttctccactttgcgcctttctgtcggcggcgggatgccagtacagaaagcc
gtggctgaaaagtgggaaaatctaaccgggaaacatttactggaaggctatggtttaacc
gagtgttcgccgttagtcactggcaacccttatgatttgaagcattacagcggcagtatc
ggcctgcctgtgccctctaccgatgttcggctggttgatgatgagggtaacgatgttgct
ttgggggaaccgggcgaactgtgggtgcgtgggcctcaagttatgttaggctattggcag
cggcccgaagcgaccgatgaagtcctaaaacagggatggctggcaacaggtgatatcgcg
acgatagatgaacaaggtttcttgcgaattgttgaccgcaaaaaggatatgattctggtt
tccggttttaacgtctaccccaacgagattgaagatgtggtggcgttacatgcgaaagtg
ttggagtctgcggttgtaggggtgcctaatgaggtctccggtgagacagtaaaattgttt
gtcgtgaaaaaagatgtctcattgacgcaggaagagttgttaacccattgccgccgctac
ctaacagggtataaagtaccgaaaatagtagagttccgcgacgagttgccgaaatcgaat
gtcggtaaaattttgcgtcgagaactgcgtgacgaacagattaaggccaaagtcagcgaa
caaaacgcggcttaa
DBGET
integrated database retrieval system
