Yersinia frederiksenii: AW19_1096
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Entry
AW19_1096 CDS
T03606
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AW19_1096 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yfr03400
]
AW19_1096 (xth)
Enzymes [BR:
yfr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AW19_1096 (xth)
DNA repair and recombination proteins [BR:
yfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AW19_1096 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
AJI85613
LinkDB
All DBs
Position
complement(1169694..1170500)
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AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVYYHGQK
GHYGVALLTKNEPLAVRRGFPTDEEDAQRRIIMADIATPQGPLTVINGYFPQGESRDHPT
KFPAKERFYADLQQYLEQQLSSDAQVLIMGDINISPTDLDIGIGEESRKRWLRTGKCSFL
PEERAWLERLQNWGLVDTFRAANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASHPLAAR
CIATGIDYDIRSMEKPSDHAPVWSEFAL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgtctcttttaatatcaatggcctacgtgctcgaccacatcaactggctgca
ataatcgaacaacatcaacccgatgttattgggcttcaagaaacaaaagtacatgatgat
atgtttccgcttgaagaggtcagtcaacatggttatcacgtctattatcatggacaaaaa
ggccattacggcgttgcattgttaaccaagaatgaacccttggccgtacggcgcggtttt
cctaccgatgaagaagatgcgcagcgccgtattattatggctgacattgcgacaccgcaa
ggtcctttaaccgtgattaatggctatttccctcaaggagaaagccgtgaccaccccaca
aagtttcctgctaaagagcgtttttatgctgacttacagcagtatttggagcagcaactg
tcatctgatgcccaagtactgattatgggagatatcaatatcagtccaacagatttggat
attggtattggcgaagagagtcgcaaacgctggttgcgtacgggcaagtgttcattcctg
cctgaagaacgtgcatggctggagcgtttacaaaattgggggctagtggatacattccgt
gcagcaaatcctgattgtaatgaccaattttcatggtttgattatcgttcgcgtggtttt
gacgaaaatagaggcttacgcatagatttattattggcgagccaccctctggcagctcgc
tgcattgccacaggtattgattacgatattagaagcatggaaaaaccctcagaccacgct
ccagtatggtctgaattcgcactctaa
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