Yersinia frederiksenii: AW19_1107
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Entry
AW19_1107 CDS
T03606
Symbol
hns
Name
(GenBank) DNA-binding protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
yfr
Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
yfr03036
]
AW19_1107 (hns)
03400 DNA repair and recombination proteins [BR:
yfr03400
]
AW19_1107 (hns)
Chromosome and associated proteins [BR:
yfr03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
AW19_1107 (hns)
DNA repair and recombination proteins [BR:
yfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AW19_1107 (hns)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
DUF6626
PaaX_C
GrpE
TetR_C_24
DUF6280
BST2
Motif
Other DBs
NCBI-ProteinID:
AJI85749
LinkDB
All DBs
Position
complement(1179582..1179992)
Genome browser
AA seq
136 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEDSQAQAEIEERTRKLQQ
YREMLIADGIDPNELLNTIAAAKAATGKSKRAARPAKYQYTDENGDVKTWTGQGRTPAVI
KKAIEDEGKSLDDFLL
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcgttaaaaattcttaacaacatccgtactctgcgtgcacaagcgcgtgaa
tgcactcttgaaactttagaagagatgctggagaaactcgaagtggtcgttaatgaacgc
cgcgaagaagactctcaagcacaggcagaaattgaagaacgcacacgtaaattacagcaa
taccgtgaaatgcttattgcagatggtattgatccaaatgaactgttgaatactattgca
gctgctaaagccgcaactggtaaatcaaaacgtgctgcacgccctgctaaatatcagtac
acagacgaaaatggcgatgttaaaacctggacaggccaaggccgtactccagcagtgatt
aagaaagccattgaagatgaaggcaaatcactagatgatttcctgctgtag
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