Yersinia frederiksenii: AW19_1373
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Entry
AW19_1373 CDS
T03606
Name
(GenBank) L,D-transpeptidase catalytic domain protein
KO
K19236
L,D-transpeptidase YcfS
Organism
yfr
Yersinia frederiksenii
Pathway
yfr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
AW19_1373
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yfr01002
]
AW19_1373
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yfr01011
]
AW19_1373
Peptidases and inhibitors [BR:
yfr01002
]
Cysteine peptidases
Family C82
AW19_1373
Peptidoglycan biosynthesis and degradation proteins [BR:
yfr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AW19_1373
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
Motif
Other DBs
NCBI-ProteinID:
AJI85992
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All DBs
Position
complement(1475685..1476752)
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AA seq
355 aa
AA seq
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MKRALTLIGMLFATCLAGSITAANATEYPLPPANSRLIGENTTYTVPNDGRPLEAIAADY
KIGLLGMLEANPGADPYLPLPGSVLTIPTQMLLPDTPREGIVINLAELRLYYYPKGQNKV
VVYPIGIGQLGRNTPTMTTTVSQKIPNPTWTPTANIRKNYLAEGITLPSVVPAGPENPMG
LFAMRLSAGKGEYLIHGTNANFGIGMRVSSGCIRLRPDDIEALFKSVPKGTRVQIINEPV
KYSVEPDGKRYVEVHQPLSRVDSDDPQTMPIAISSSLQKFINDSQTDAQVVQEAIVRRAG
MPVIVTVGETATEQAPVAVAPQGEQQAQPQNEEQQPTEQEMPKLVQPGPVYSAAN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgcattaactttgattggtatgttattcgcaacttgtctggcgggaagtatc
actgctgccaatgcgaccgagtatcctctgccgccagccaatagtcgtctgattggtgaa
aatactacttatactgttccaaatgatggccgtccgctggaggctattgctgccgattat
aaaatcggtttgttggggatgctggaagcaaacccaggtgctgacccgtatttgccatta
ccgggttcagtgctcactattccgacccagatgttgctgccagataccccacgtgaaggt
atcgtcatcaacttggctgaactgcgcctttattattaccctaaaggtcaaaacaaagtt
gtggtgtacccaatcggtatcggccagttagggcgtaataccccaacgatgacaaccaca
gtcagccaaaagatcccgaacccaacctggacaccaacggcaaatatccgtaagaactat
ttggcggaaggtattactttgccatcagtggttccggccggcccggaaaaccctatgggg
ctgtttgctatgcggttgtctgcggggaaaggtgaatacttgatccacggcaccaacgcg
aactttggtattggtatgcgtgtcagctccggctgtatccgcttacgtccggatgacatt
gaagcgctgttcaaatccgtacctaaaggtactcgcgtgcaaatcatcaatgaaccggtt
aaatattctgttgagccagatggtaagcgttatgtggaagttcatcagccgttgtctcgt
gtagacagtgatgatccgcaaacaatgccaattgctatcagcagcagcctgcagaagttt
atcaacgacagccagactgatgcacaagtggttcaggaagcgattgttcgccgtgctggt
atgcccgtcatcgtcactgtaggtgagactgccactgagcaggctccggttgctgtagcg
cctcagggcgagcaacaggcacaaccacagaacgaagagcagcaacctacggagcaagag
atgcctaagttggttcaaccaggcccggtttattcagctgcaaactaa
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