Yersinia frederiksenii: AW19_1431
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Entry
AW19_1431 CDS
T03606
Name
(GenBank) periplasmic pectate lyase family protein
KO
K01731
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr00040
Pentose and glucuronate interconversions
yfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AW19_1431
Enzymes [BR:
yfr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
AW19_1431
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GFIT
Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
AJI88202
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Position
1541020..1542687
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AA seq
555 aa
AA seq
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MNFVGNIKDSDAVMINWLSAIRSYVELVQSVSHSHQNPTPLMADGFDVLTHQPVTWKFPD
GRDIPISNFASQQNWLRTLDALSLVTQDPQYHQQARVQSRYFMQKGVHEQSGLFYWGGHR
FLNLDTLQTEGPESKAQVHELKHHLPYYDLLLSVDREKTLNFLQGFWHAHVEDWQTLDLG
RHGSYDKQRDPHVFTHVRNDVVKPEALPQLPETKGLTFVNAGTDLIYAAYKYAAYTGDIA
AAAWGKHLYRQYVLARNPETGLPVYQFSSPQQRRPIPADDNQTQSWYGDRAKRQFGPEFG
EIAREANVLFRDMRPLLIDNPLAMLDILRQQPDAEVLQWVIDGLKNYYRFAYDVESNTLR
PLWNDGQDMSGYVLQRDGYYGAKGQVISSFPLEVDYLLPLVRAWRISEDEELFDLIGVLL
HRWQLAELNKQERRAVLINDKKTVISPSLLLALVELAEHCQCKQLFELAWQIGNDLFNQH
YHRGLFVESAQHRYFRIDNPIALAILTLIAAKQNKLAAVPQFITNGGYIHGDYQVNGESR
TLYDIDFIYPTLLNQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgtcggtaacattaaagacagtgacgcagtgatgattaactggctcagcgct
atccgtagctatgttgaattagtccagtctgttagccatagtcatcaaaacccgacccca
ctaatggccgatggctttgatgttttgactcaccaacctgtgacctggaaattcccagat
ggccgtgatattccgatatctaacttcgccagtcaacaaaactggctacggacgttggat
gctctcagcctggtcacacaagacccgcaatatcatcaacaagcgcgggtacaaagccgc
tatttcatgcaaaaaggtgttcatgagcagagcgggctgttttattggggtggtcaccgc
ttcctgaatttggacactttacaaactgaaggcccagaatcaaaggcgcaagtgcatgaa
cttaaacatcacctgccctattacgacttattgctcagtgttgatcgtgagaaaacgctt
aatttcctacaaggtttttggcacgcccatgtcgaagattggcaaacactggacctaggc
cgtcatggtagctatgacaagcaacgcgacccccatgttttcacccatgtgcgcaatgac
gtggttaaaccagaagcattgccacaattaccggagactaaaggcctgacctttgtgaat
gccggtaccgacctcatttatgcagcttataaatatgcggcgtatacgggtgacatcgca
gctgctgcttggggaaaacatctataccgtcaatacgtcttagcccgtaatcctgaaaca
ggattaccggtttatcagttcagttcgccgcaacaacgtcggccaataccggcagatgat
aatcagacccaatcctggtatggcgatcgagccaaacgccaatttggccctgaatttggt
gaaattgcccgtgaagccaatgtcttgttccgtgatatgcggccattgctgattgataac
ccattggcaatgttggatatcttgcgccagcaacctgatgcggaagttctgcaatgggtt
attgatgggttaaagaattattatcgtttcgcttatgatgttgagagcaatacattgcgc
ccgttatggaacgatggacaggatatgagcggttatgtcttacaacgcgatggttattat
ggcgcaaaaggccaggttatttcgtcattcccattagaggtcgattatctgctcccgctg
gttcgtgcctggcgaatcagtgaagacgaagaattattcgatctgattggggttttgttg
caccgctggcagttggctgaattaaacaaacaagaacgccgcgcagtgctaatcaatgac
aaaaaaacagtgatttccccgtctttactactggccttagttgaactggccgagcattgc
caatgcaaacaattatttgaattagcttggcaaattgggaatgacctatttaaccagcat
tatcatcgcggcttgtttgtcgaatcagcacagcaccgttattttcgtatcgacaatccg
attgcattagcaatattgaccttgattgctgccaaacaaaataaattggcagccgttcct
caatttattaccaatggtggttacatccatggagattatcaggtgaacggagaaagccgc
actctgtatgacatcgattttatttatccgacacttttgaatcagtag
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