Yersinia frederiksenii: AW19_1440
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Entry
AW19_1440 CDS
T03606
Symbol
kdgR
Name
(GenBank) pectin degradation repressor protein kdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
yfr
Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yfr03000
]
AW19_1440 (kdgR)
Transcription factors [BR:
yfr03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AW19_1440 (kdgR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
TrmB
HTH_24
HTH_5
MarR_2
Rrf2
Fe_dep_repress
Mga
PadR
HTH_45
HTH_11
MarR
Motif
Other DBs
NCBI-ProteinID:
AJI87409
LinkDB
All DBs
Position
complement(1551890..1552681)
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AA seq
263 aa
AA seq
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MAIADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMPKSTVYRFLQTMKSLGY
VAQEGESEKYSLTLKLFELGAKALQNVDLIRSADIQMRELSNETRETIHLGALDEDSIVY
IHKIDSMYNLRMHSRIGRRNPLHSTAIGKVLLAWRDRGEVEEILSHVEFTRSTKHTLGSA
TELLPVLDQVREQGFGEDIEEQEEGLRCIAVPVFDRFGVVIAGLSISYPTLRFSEDSKSN
IVKSLHRAARNISEQMGYRDYPF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggctattgcagatttagataaacagcccgactctgtttcgtcggttctgaaagttttt
ggcatcttacaagccttgggtgaagagcgggaaataggtattaccgagctttctcagcgt
gtaatgatgcctaagagtaccgtgtaccgcttcctacagaccatgaaatctttgggatat
gtcgcacaggaaggcgaatcagagaagtattccctgactctgaagttatttgagttaggc
gctaaagcattacaaaacgtcgatttgatccgtagcgctgatatacaaatgcgtgaatta
tccaatgaaactcgtgaaactattcacttgggtgccttggatgaagatagcatcgtttat
atccataaaatcgattctatgtataacctgcggatgcattctcgtatcggccgtcgtaac
ccgctgcacagtactgccattggtaaggtattgttggcgtggcgtgatcgcggcgaagta
gaagaaatcttgtctcatgtcgagtttacccgcagcaccaaacacacgctgggcagtgca
acggaactgttgccggtgttagatcaggttcgtgagcaaggcttcggtgaagatatcgaa
gaacaagaagaaggtttacgttgcattgctgtgccggtttttgaccgtttcggtgtcgtc
attgcgggtttaagtatttcatatccgacgttgcgattctctgaagatagcaagagtaat
attgtgaaatctttgcatcgcgctgcacgtaatatttctgagcaaatgggctatcgcgat
tatcctttctga
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