Yersinia frederiksenii: AW19_1487
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Entry
AW19_1487 CDS
T03606
Symbol
exoX
Name
(GenBank) exodeoxyribonuclease 10
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AW19_1487 (exoX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yfr03400
]
AW19_1487 (exoX)
DNA repair and recombination proteins [BR:
yfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AW19_1487 (exoX)
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
TFIIF_beta
Motif
Other DBs
NCBI-ProteinID:
AJI87704
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All DBs
Position
1595667..1596326
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AA seq
219 aa
AA seq
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MYFRVIDTETCGLEGGIVEIASVDMVDGLLSNPMSDLVSPDRPISLDAMVIHHITEEMVE
GKPRIAVAVRKYQGSPYYVAHNAPFDRGVLPEMGGQWICTLKLARMLYPDIKHSNQYLRY
ALRLNVSVPDNLYPHRALYDCYVTAALLQRIIRDSGWNAEQMVEMTQQPLLLQTFKFGKY
RGKSIEQIARQDPDYLRWMLTSIADLTPDMRHTLTHYLT
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtattttcgtgtcatcgatacagaaacttgtggtttggaggggggtattgtcgaaatc
gcgtctgtcgatatggtggacggattattgagcaaccctatgagtgacttggttagccca
gacaggccaatcagtctcgatgccatggtaattcaccatatcacggaagaaatggtggaa
ggtaaaccgcgaattgccgttgcagttagaaaatatcaagggagcccgtattatgtcgct
cataacgccccctttgaccgcggtgtgttaccggagatgggtggtcaatggatttgcacc
ttaaagctcgcccgtatgctctaccctgatattaagcacagtaatcaatatctgcgttac
gctttgcgcctgaatgtttcagtgccagataatctttatccacatcgtgctttgtatgat
tgttatgtcaccgccgcactgttgcaacgcatcatacgagactctgggtggaacgccgag
cagatggtggaaatgacgcaacaaccgctgttgttacagacatttaagttcgggaaatat
cgtggaaaaagtattgaacagatagcccggcaagatccggactacctgcgctggatgctg
acctcaattgccgaccttacgccagatatgcgccataccctgacacattatctgacataa
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