Yersinia frederiksenii: AW19_178
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Entry
AW19_178 CDS
T03606
Name
(GenBank) bacterial extracellular solute-binding s, 3 family protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
yfr
Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yfr01011
]
AW19_178
Enzymes [BR:
yfr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AW19_178
Peptidoglycan biosynthesis and degradation proteins [BR:
yfr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AW19_178
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
AJI85740
LinkDB
All DBs
Position
complement(173929..175389)
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AA seq
486 aa
AA seq
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MTRIKLNYFVIGLVALLLALALWPNIPWRNGQEGQLDRIKARGELRVSTISSPLIYSTGK
DGSSGLDYELAQRFADYLGVKLVMTPHHNINDLFDALDSDDADLIAAGLIYNRERLNRAR
TGPAYYSVSQQLVYRLGSPRPKSFSDLKGQLIIASGSAHMTTLKQLKKTKYPDLNWGSSV
DRSGKELLEQVADGKLDYTLGDSVTIALLQRIHPQLAVAFDVTDEEPVTWYFQQSNDDSL
YAAMLDFYSEMVEDGSLARLEEKYLGHVGSFDYVDTKTFLSAIDNVLPSFQPLFEKHAGE
IDWKLLAAIAYQESHWNPQATSPTGVRGLMMLTRATASGLGVKDRVDPEESIKGGSIYLQ
RLMRKVPETIPEDERIWFALASYNMGYGHMLDARKLTKKQNGNPDSWVDVKMRLPMLSQK
SYYPSTTYGYARGHEAYNYVENIRRYQVSLVGYLQEKERKAAQHAAIEAELGKAYPVVGP
GWSINN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcgcataaaattaaattactttgtcatcgggctagttgccttacttctggctctc
gcgttgtggcccaatattccttggcgcaatgggcaagaagggcaactggaccgtataaaa
gcccgtggtgaactgcgagttagcacaataagttcaccactgatctactctaccggaaag
gacggatcttccggcctcgactatgagctggcacaacggtttgctgattatctgggggtt
aagctggtgatgaccccccatcataatatcaacgacttatttgatgctttagatagtgac
gatgccgacctcattgctgctgggctgatttataaccgcgaacgccttaatcgggcgcgt
actggccctgcctactattccgtgtcgcaacaattagtctaccgtttgggttcaccgcgg
cctaaatcatttagtgacctgaaaggccagctgattattgcctccggctcggcccatatg
accaccttgaaacagcttaaaaagaccaaatatccagatctgaactgggggtcatcggtt
gatcgctccggtaaagaattactggagcaagtcgctgacggtaagctcgactataccctt
ggggattctgtcactattgctctgctgcaacgtattcacccacaattagcagtggctttt
gacgtcacggatgaagaaccggtgacttggtatttccagcaaagtaatgatgacagcctg
tatgcggcgatgcttgatttctacagtgagatggtagaagacggcagtttggcgcgtctg
gaggaaaaatatctcggccatgtcggcagttttgattatgtcgacaccaaaacattcctc
tccgccattgataatgtgctgccctctttccagcccttatttgaaaagcatgccggtgaa
attgactggaaattactggccgcgatcgcctatcaagaatcccattggaatccgcaagca
acctcacccacaggggtgcgcggcctgatgatgctcacacgggccaccgccagtggcttg
ggcgtgaaagaccgagttgatcctgaagagagtatcaaaggcggttcgatttacttacaa
cggctgatgcgaaaagtgccggagaccatcccagaagatgagcgaatttggttcgcactg
gcgtcatataatatgggttatggccatatgcttgatgcccgcaagctgaccaaaaaacaa
aatggtaatccagacagttgggtggacgtaaaaatgcgcctaccgatgttgagccagaag
agctactacccgagcaccacctatggctatgcccggggtcacgaagcctataactacgtt
gaaaacatccgccgctatcaggtgagtttggtgggttatttgcaggaaaaagagagaaaa
gccgctcaacatgccgcgattgaagccgaactgggtaaagcctatccggtcgtcggcccc
ggctggtcaatcaataactaa
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