Yersinia frederiksenii: AW19_189
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Entry
AW19_189 CDS
T03606
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr00260
Glycine, serine and threonine metabolism
yfr00460
Cyanoamino acid metabolism
yfr00630
Glyoxylate and dicarboxylate metabolism
yfr00670
One carbon pool by folate
yfr00680
Methane metabolism
yfr01100
Metabolic pathways
yfr01110
Biosynthesis of secondary metabolites
yfr01120
Microbial metabolism in diverse environments
yfr01200
Carbon metabolism
yfr01230
Biosynthesis of amino acids
yfr01240
Biosynthesis of cofactors
yfr04981
Folate transport and metabolism
Module
yfr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AW19_189 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AW19_189 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AW19_189 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AW19_189 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AW19_189 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AW19_189 (glyA)
Enzymes [BR:
yfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AW19_189 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AJI89247
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All DBs
Position
190555..191808
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AA seq
417 aa
AA seq
DB search
MLKREMNIADYDADLWRAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANVAVYSALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYEDMARQAEIHKPKMIIGGFSAYSGI
VDWAKMREIADSIGAWFFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSSVFPANQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVA
VFLDRGYKVVSGGTDNHLFLLDLVDKDITGKDADAALGRANITVNKNSVPNDPKSPFVTS
GVRIGSPAITRRGFKEEESRELAGWMCDVLDNITDEATIERIKQKVLAICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgcagacctatggcgtgcaatggag
caagaagtggtgcgccaggaagagcacattgagctgattgcctctgagaactacaccagc
ccgcgtgttatgcaagcacaaggttctcagttgacgaataaatatgctgaaggctatccg
ggcaagcgttactacggtggctgtgagtatgtcgatattgttgagcaactggcgattgat
cgtgcaaaagagttgtttggcgcggattacgccaacgttcagccacattctggttctcag
gcgaacgtggcggtttactcagcattgctgaaacctggcgacactgttctggggatgaat
ctggcacacggcggccatttgacccacggttcaccggttaacttctccggtaaactgtac
aatatcgttccttacggtatcgatgaatctggcaaaattgattatgaagatatggcgcgt
caggccgaaattcataaaccaaaaatgatcatcggcggcttctctgcctattccggtatt
gttgattgggcaaaaatgcgcgaaatcgccgacagcatcggcgcatggttctttgtcgat
atggcgcacgtcgccggtttggtggctgcgggcgtttatcctaaccccgtcccacatgca
cacgtcgtgaccactaccacgcacaaaacactggctggcccacgcggcggtttgattttg
gcgaaaggcggcgatgaagatttgtacaaaaaactgaactcgtctgtgttcccagcgaac
cagggcggcccattgatgcacgttattgcgggcaaagcggttgcgctgaaagaagctatg
gaacctgagttcaaggtttaccagcaacaagtggctaagaacgcgaaagccatggtggcg
gtcttcctggatcgcggctacaaagtggtttctggcggtacagataaccacctgttcttg
cttgatttggtagataaagacatcaccggtaaagatgcagatgctgctttgggtcgtgcc
aatatcaccgtgaacaaaaacagcgtgccaaacgatccgaaaagcccgtttgtgacttca
ggtgtgcgtatcggcagcccggctattactcgtcgtggttttaaagaagaagaatctcgc
gagctggctggctggatgtgtgatgtgttagataacatcactgatgaagccactatcgaa
cgtatcaaacagaaagttttggctatctgcgcccggttcccggtttacgcataa
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