Yersinia frederiksenii: AW19_19
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Entry
AW19_19 CDS
T03606
Symbol
amiC
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase AmiC
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
yfr
Yersinia frederiksenii
Pathway
yfr02010
ABC transporters
yfr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AW19_19 (amiC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AW19_19 (amiC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yfr02000
]
AW19_19 (amiC)
Transporters [BR:
yfr02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
AW19_19 (amiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_5
Peripla_BP_6
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
AJI85747
LinkDB
All DBs
Position
complement(16776..17942)
Genome browser
AA seq
388 aa
AA seq
DB search
MSSDIPVNIGLLYSFSGVTAAQELSQWRGATQAIAEINHHGGINGRPLNAIHFDPQSDDA
QFRALAEQLIVEHEVNVIFGGYTSSSRKAMSPIVEKYRRLLFYSQLYEGFEFSDNIFYGG
AAPNQNCVQLADYLTGQFGARVYLIGSRYIYPYECNRNMQELILQRHDGAVIGERYLDLN
APYEAFLPIIEEISKKQPDFIFSTVVGQTVPFLYQAYQAAGLDPARMPIGSLNTSETEIA
IMGAEVAQGHFSSAPYFQSIGTQANQSALKQFHQQFGPELTTDMNWEATYSQVHLFAKAM
AECGSDHIYPLSAALRGSQFDAPQGRIRIDPLNQHTGLYPRIGMANESGQFTIVQESRRI
VEPDPYMTHQIQGDWVTKLTTVGYPHAT
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagatatcccggtcaatattggcttgctctactctttcagtggagtgacggcg
gcacaagagttgtcgcaatggcgtggggcgacacaggcgattgctgaaattaaccaccat
ggtggcatcaacggcaggccgctgaatgcgattcattttgacccacaatctgatgatgcg
cagttccgtgctttggccgagcaactcattgtcgaacatgaggttaatgtgatttttggc
ggctatacctccagtagtcgcaaagctatgtcgccgattgtagaaaaatatcggcggctg
ctgttctattcgcaactgtatgaaggttttgaattttctgacaatattttctatggcggt
gctgcgcccaatcaaaactgcgtacaactggcggattatttaactgggcagtttggcgcg
cgcgtgtatttgattggctcgcgctatatttacccctacgaatgtaaccgcaacatgcag
gagctaattctgcaacgccatgatggtgcggttatcggcgagcgctaccttgatctgaat
gccccttatgaagctttcttgcccatcattgaggaaataagcaaaaagcagccagatttc
atctttagcactgtggtgggacaaactgtccctttcttgtatcaagcttatcaggccgcg
gggctagatcctgcccgtatgcctattggcagcctgaatacatcagaaacagagattgcc
attatgggggcggaagtggcacagggtcatttcagttcagccccttatttccaaagtatt
ggcacccaagccaatcaatcagcactcaaacaatttcatcaacagttcgggccggaactc
accaccgacatgaattgggaagccacctacagtcaggtgcatttattcgccaaagctatg
gcggagtgcggcagtgaccatatttatccgctttctgccgccctgcgcgggagccagttt
gatgcgccacaaggccgcattcgtattgatccgctgaatcaacatactgggctttatccg
cgcattggtatggcgaatgaaagtgggcaatttactatcgtgcaggaatctcgccgcatc
gtcgaacccgacccctatatgacccaccagattcagggcgattgggtcaccaaactcacg
acagtggggtatccacatgcgacctag
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