Yersinia frederiksenii: AW19_2310
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Entry
AW19_2310 CDS
T03606
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr00300
Lysine biosynthesis
yfr00470
D-Amino acid metabolism
yfr01100
Metabolic pathways
yfr01110
Biosynthesis of secondary metabolites
yfr01120
Microbial metabolism in diverse environments
yfr01230
Biosynthesis of amino acids
Module
yfr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AW19_2310 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AW19_2310 (lysA)
Enzymes [BR:
yfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AW19_2310 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AJI88867
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Position
complement(2495685..2496947)
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AA seq
420 aa
AA seq
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MPRALNDISTALTAQNLIALPERFGCPVWAYDGEIITQKINQLRHFDVIRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALQAGFQPGQEPAEIVFTADLLDQATLLRVTELNIPVN
AGSIDMLDQLGQHAPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPQAIEKIQQ
YGLTLVGIHMHIGSGVDYQHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDDID
TEHYYGLWNRAREKIAAHLGHAVSLEIEPGRFLVAESGVLIAQVRAVKNMGRRHYVLVDA
GFNDLMRPAMYGSYHHISLLPADGRSLAGEPLLDTVVAGPLCESGDVFTQEAGGGLETRA
LPTAKIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIALELI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgcacttaacgatatttctacggcactgactgcccaaaatctgattgcttta
ccagagcgttttggttgcccggtttgggcctatgatggtgaaatcattactcaaaaaatc
aatcaattgcgtcattttgatgtcattcgttttgctcagaaagcctgttcaaatattcat
attttgcggttgatgcgtgagcaaggggtcaaagttgactcggtatcactgggcgagata
gaacgcgcattacaggctggtttccagccgggacaggaacctgctgagattgtctttact
gccgatttgctggatcaggccacattattgcgagtgacggaattaaacatcccggtgaat
gctggctccatcgatatgcttgatcaactggggcagcatgcgcccggccaccctgtctgg
ctgcgggtcaatccggggttcggccatggacacagtcagaaaaccaataccggcggtgaa
aacagtaaacacggtatttggcatgaagatttgccgcaagccattgagaaaattcagcaa
tatggtttaacgctggtgggcatccatatgcatattggctccggtgttgattatcagcat
ttggaacaagtttgtgatgctatggtgcagcaggttatcgcgcttgggcaagatatcagc
gctatttcggctggtggcgggttatctattccgtaccaatttggtgatgatgatattgat
accgaacattattatggtttatggaatcgcgctcgcgagaaaattgccgcccatttgggc
catgctgtcagtcttgaaattgaacccggccgcttcctggtggccgagtccggtgtgcta
atcgcgcaagttcgggcggtgaaaaatatgggccgccgacactatgttttggtggatgcg
ggctttaatgatttgatgcggccggccatgtatggcagttaccatcatatttcgttgcta
cctgccgatgggcgctcactagcgggcgagccactgcttgatactgtggtcgctggcccg
ctttgcgagtctggggatgtgtttactcaagaagccggtggtgggttagaaacccgtgca
ttacctaccgccaaaattggcgactatttggtattccatgataccggggcttatggcgca
tcaatgtcttctaactacaatagccgcccattattaccagaagttttgttcgagcagggg
cagccgcgtttaattcgccgccgccaaaccatcgaagaacttattgcattagagctgatt
taa
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