Yersinia frederiksenii: AW19_2573
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Entry
AW19_2573 CDS
T03606
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
yfr
Yersinia frederiksenii
Pathway
yfr02020
Two-component system
yfr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AW19_2573
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AW19_2573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yfr03021
]
AW19_2573
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
yfr02035
]
AW19_2573
Transcription machinery [BR:
yfr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AW19_2573
Bacterial motility proteins [BR:
yfr02035
]
Flagellar system
Flagellar assembly proteins
Stator
AW19_2573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
MarR_2
HNH_repeat
DUF4143
GerE
HTH_23
TgpA_N
Clr5
BORCS7
Motif
Other DBs
NCBI-ProteinID:
AJI88588
LinkDB
All DBs
Position
complement(2786701..2787387)
Genome browser
AA seq
228 aa
AA seq
DB search
METNDNLALTPAEEGKYLEAYLPLVKRIVRQLSFQADSVIGKEDMQQIALMGLLEALRRY
GHPDGQFAAYAVHRIRGAVLDQLREHDWRPRRLRQKTHKTNEAIRQLAKRLGHEPSFEEI
AAELQLTAEEYQEYLLLESASGMESLDEILSLDTPTDALQSRELEESIIIEDNLNHAIAS
LEKREKMILHLYYQQEMSMKEIAQVLDLTEARICQLNKKLVQKIKSFF
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggaaactaatgataatttagcactgactcctgcagaggaagggaaatatctggaagcg
tatttgccgctggtaaaacgtattgtcagacaactttcatttcaagcagacagtgttatc
ggcaaggaggatatgcagcaaattgcattgatggggctattagaggcattacgccgctat
ggtcaccctgatgggcaatttgctgcctatgccgttcatcgaattcgtggtgcggtgctg
gaccaattgcgggagcatgactggcggccgcgccggttgaggcaaaaaacgcacaagact
aatgaggcaatacgacaattggccaagcgattgggccatgaaccgagctttgaggaaata
gcggccgagctgcaactaacagcggaggaatatcaagaatacctgcttttggaaagtgcc
agcggcatggagagtttggacgaaatactgtcattagacacgccgactgatgcgttacag
agcagagagttagaagaaagtattattattgaagataatctgaaccatgctattgcgtca
cttgagaagcgagagaaaatgattctgcatctttattatcaacaagaaatgagtatgaaa
gagattgctcaggtcttagatctcactgaagcacgaatttgtcagctaaataaaaaacta
gttcaaaaaattaaatcatttttttaa
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