Yersinia frederiksenii: AW19_2788
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Entry
AW19_2788 CDS
T03606
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
yfr
Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yfr03000
]
AW19_2788 (treR)
Transcription factors [BR:
yfr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AW19_2788 (treR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_1
Peripla_BP_3
HTH_3
HTH_31
HTH_23
HTH_IclR
MarR_2
HTH_7
Peripla_BP_4
CENP-B_N
HTH_Tnp_ISL3
HTH_AraC
SpoIIID
HTH_Crp_2
MarR
TrmB
HTH_26
HTH_24
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AJI85437
LinkDB
All DBs
Position
complement(3016328..3017275)
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AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARMSGVGKSTVSRVLNNESSVSPQTRERVEAVIRQQGFTPSKSARAMRGQ
SDKVVGIIVSRLDSPSENQAVRTMLPLFYQQGYDPILMESQFDPNLVSEHLHVLQQRYVD
GVILFGFTGLTAEMLAPWQEKMVVLAREYAGFSSVCYDDEGAVRLLMDKLRQAGHRHISY
IGVQPSDATTGMRRHQSYLDYCQQYGLTPIVALGELSYQSGFLLAPQVIKPDTSALVCAS
DTIAMGVSKYLQQQGQQNIQVCGIGNTPLLSFLFPNSLSVELGYGSAGVKAASQLLDQLN
NNQPIQQIIIPGQLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccgtttgaccattaaggacattgcccgcatgagtggagttggaaaatccacg
gtttcgcgggtcttgaataatgaaagcagtgtcagcccacagactcgcgagcgggtcgag
gcggttattcgtcagcagggatttaccccatcgaaatcggcccgcgcgatgcggggtcag
agtgataaagtggtggggattattgtctcgcgtctggattccccgtctgagaatcaggcg
gtgcgcaccatgctgccgctgttctaccagcaaggttacgaccctatcttgatggaaagc
cagtttgaccccaatttggtcagcgagcatttgcatgttttacaacagcgctatgtcgat
ggtgtcattctttttggtttcaccggcttaaccgcagaaatgctcgcgccatggcaggaa
aaaatggtggtattggcgcgagaatatgccggtttttcttcggtttgttatgacgacgaa
ggtgcggtgcgtctcttgatggataaactacgtcaggccggacatcgccatatcagttat
atcggggtgcagccctcggatgccactaccggtatgcgccgtcaccaatcctatctcgat
tactgccagcaatatggcctgaccccgattgtcgcgttgggtgaattgagctatcagagt
ggctttctgctcgcgcctcaagtcataaaaccggatacctccgcgctagtttgtgcctct
gataccatagccatgggggttagtaagtatttgcagcagcaagggcagcaaaatatccag
gtttgtggtatcgggaataccccgctgttgagctttttgtttcctaatagcctgtcagtt
gagctgggttacggtagcgccggtgtgaaagcggcatcgcaactgcttgatcaacttaat
aataatcaacccattcaacaaattatcattcccggtcaattagcttga
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