KEGG   Yersinia frederiksenii: AW19_2878
Entry
AW19_2878         CDS       T03606                                 
Symbol
shlA
Name
(GenBank) hemolysin
  KO
K11016  hemolysin
Organism
yfr  Yersinia frederiksenii
Pathway
yfr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:yfr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AW19_2878 (shlA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yfr02044]
    AW19_2878 (shlA)
   02042 Bacterial toxins [BR:yfr02042]
    AW19_2878 (shlA)
Secretion system [BR:yfr02044]
 Type V secretion system
  Two-partner secretion (TPS) family
   AW19_2878 (shlA)
Bacterial toxins [BR:yfr02042]
 Type II toxins: Membrane damaging toxins
  Pore-forming toxins, Other
   AW19_2878 (shlA)
SSDB
Motif
Pfam: Fil_haemagg_2 TPS Pirin_C_2
Other DBs
NCBI-ProteinID: AJI85700
LinkDB
Position
3119485..3124344
AA seq 1619 aa
MKQNKFKLSPTGKLAAAVAIISVSVATCYAAGIVGAGDPAHNPGINSVNGVTVVNIVKPS
ASGLSHNQYNEFNVNKVGAVLNNSLSAGQSKLAGQLSANQNLNGQAANIILNEVISRNPS
LLLGKQEVFGMAADYILANPNGITCNSCGFINTNRTSLVVGNPLVDQGNLQGFDTRNNTN
LLNIGKGYEIFGGLLDLIAPRINMLGSMDSRDNINIILGQNKVSADGKILKSDAYTGVAY
DSKIFGSMVANRIRIINTAEGNGVNMSKGYTGRESIEISTPGRLNLDVDSDPELNYNPTP
ASLSGENITISAGDIFTSGDIIETSSNGSTTQTLDRTKIKGSNISIVAKRDNHLDAAIID
GKNVIMQGDNIQLGTEKITNTQSSSSKDGADGFLGIGKWNKSSNKKSEQQKNIGTTITAG
NNLSLQSTNGDIKLSGASIEAGNNLSIKAKKDLKLESVINNNSIHDKGHDYAHTIKDIAW
NNETDTQTLNETTLHAGGNMGLAAEGKISTNGVKAAAGGDLLINANEVKIDVQKTRNQIV
TNGKNEQNLGLGGIDHNNNDKNAETSHRSEITAEGNILVVGNKGVSITGSKVKGAKDGYV
QAAEGGIKIDNAISTTTTKIDERTGVAFNITGSSHKANNRDEEITGSELVSDANLKILSK
DNVDVIGSLVKSAGELGIETLGEINIKAAAEQQKIDEQKTKLTIEGFTQDDGNDQYQAGL
KLEHTSESEKTESVKHHGASLEGGTITLDAGKDVTFTGSNLTATQGNAEIKGENVSFIAA
QDTLSSNKEKETVGVDVHYDGGMDKAGSGANVSYEDTQATTDKSTAVVSGSQVAGNLNIN
AAKDVTNQGSDHQVDGSYNVNATNVNNLAAENSEKTVTNTTTVDVGYGANIAYGEVTRPI
KDMVEKAQELDLGGMLDAADEFGGPNAGLDVYAKGGTKETSLSSNTSTGTSIKGGDININ
ATGAVKDQGTEYQADKGSITLNAASHTSEAAVNRVEQHIKETSGGADIRIYTTTGKDITV
DGKGKGGSKVQLVTGEIAQVGSMNAANGININVKEDAIYQGTNMDAGDGKISVNAGGDIR
FDQVTNLTSESHNNVDVNAKMNLGTNTNSKEFGAGLGGGHSKGESSTSIAQVSNLQGQQG
VELNTGKDLTLTGTSFGSKEKATGDVLLAAAGKVDIKAAESQGSKQDMTWSASANAGISK
SKGTDNGKGISAGMQVDVAKTDESATKYQGSVINSSGALTVKAGSADKQAIHMQNTHINS
QKTTLTADKGGILLESAQDKEHKNNWSFGVEANAQQNSTFNKDDKGIADNKSNEKIHDIG
AKLKVDIDNVNAITQQNTQINSDNINLHTAKDLMLAGAQLKAEHINGNVGGNLVVESRLD
QLHKVNVSTALGASHSNGKQDSLNTQLADSSPIGSDKVKKKLDTKSNKLFDKIKKQYDQI
SSKFTTKEEDNVKTLSYTKEGKKMTLDESTSEEETKDKWWQKGAKTVGNKVKNKVQNESV
KGGNGKGKIEVEVVENEAVEEQSSISGQETVNLKVGGKTQLIGGKISNQNSDVTLETHGL
ELQDINGKHTEGGARIMASSKVTEMIGSGLSDLKDGKTPVLGAHGGSEQKNAMAGVTRG
NT seq 4860 nt   +upstreamnt  +downstreamnt
atgaaacaaaataagttcaagctctccccgacaggaaagctggcggcagccgtcgctatt
atttcagtatcagtagccacctgttatgccgcaggtattgtcggtgcgggcgatcccgct
cataacccagggattaattcagtcaatggggttacggttgtcaatatcgtcaaaccctcg
gcctccggtttatcccataaccaatataatgaatttaacgttaacaaagtaggtgcagta
cttaataactccctcagtgcaggccaatcaaaattggcagggcaattaagcgccaaccaa
aatttaaatggtcaagccgccaatattattttgaatgaggtcattagtcgcaacccatca
ttattattgggaaaacaagaagtcttcggcatggccgccgattatattctggccaacccc
aatggtattacctgtaacagttgcggttttattaatactaatcggacttcattggtggtc
ggtaatccactcgtcgaccaagggaatctacagggttttgataccagaaataacaccaac
ctattgaatattggtaaaggttatgaaatttttggtgggctactggatttaattgcgcca
cgcattaatatgctcggaagcatggattccagagataatatcaatattatattgggccaa
aataaagtcagtgcggatggaaaaatactcaaatcagacgcctatactggcgtcgcatat
gacagtaaaatatttggcagtatggtggctaacagaattcgtattattaatactgcggag
gggaatggtgtcaatatgtcgaaagggtatactggccgtgaatcaatagagatttcaacg
cctggcagacttaatcttgatgtcgattccgatcctgaattgaattataaccctactccc
gccagcttaagtggtgaaaatataacaatcagcgccggtgatattttcacctcaggcgat
ataattgaaacctcttctaatggttcgacgacacaaacactcgatcgcaccaaaattaaa
ggttctaatatttctattgttgccaagagagataatcaccttgatgccgccatcattgat
ggtaaaaacgttattatgcaaggtgataatattcaattaggtacagaaaaaattactaat
actcaatcgagtagttctaaagatggcgctgatggatttttggggataggtaagtggaat
aaatcttccaataaaaaatctgaacaacaaaaaaatattggcaccactatcactgcaggg
aacaacctttctcttcaatcaactaatggagatataaaactctctggagcttctattgag
gcaggtaacaatctctctatcaaagccaagaaagacttaaaattagagagtgtgattaat
aataattcaatccacgataaaggccatgattatgcacataccatcaaagatattgcctgg
aataatgagacagacacccaaacactgaatgaaaccacgctacacgcgggtggaaatatg
gggctggccgcagaagggaaaattagcaccaatggggttaaggccgctgctggcggtgat
ttattaatcaatgccaatgaagtcaagattgatgtacaaaagacccgaaaccagatagtc
actaacggcaaaaatgaacaaaacttaggtctagggggtatagaccataataataacgat
aaaaatgcagaaaccagccaccgctctgaaataaccgctgagggtaatattcttgttgtt
ggtaataaaggtgtctctattaccggcagtaaagtcaaaggtgccaaagatggttatgtt
caagcggcagagggcgggattaaaatcgacaatgccattagtaccaccactaccaaaatt
gatgagcgcaccggcgttgcttttaatatcaccggcagttcacataaagccaataatcgt
gatgaagagattaccggcagtgaattagtttcagatgcgaatcttaagattctcagtaaa
gataatgtcgatgtgattggtagcttggtcaaaagtgccggagaactgggcatagaaacc
cttggtgaaattaatattaaagcagcggcagaacagcagaaaatagatgagcaaaaaacc
aaactcaccatcgaaggctttacccaggatgacggtaatgatcaataccaggccgggctg
aaactggaacataccagtgaaagtgaaaagacagagagcgttaaacaccacggcgcaagc
cttgagggcggcacaattacgctggatgcagggaaagacgtcacatttaccggttcaaac
ctgaccgccacccaaggtaatgccgagattaaaggtgaaaatgtctcattcatcgcagca
caggacaccctcagcagcaataaagaaaaagagactgtcggtgttgatgttcattacgac
ggcgggatggataaagcgggcagcggggccaacgtcagttatgaagacacgcaagctacc
acagataaatccaccgccgtggtttcgggttcacaggtcgccggtaacctgaatatcaat
gccgcaaaagatgtcactaaccaaggaagtgaccatcaggtcgatggttcgtacaacgtc
aatgcgaccaatgttaataatctcgccgctgaaaacagtgaaaaaaccgtcaccaatacc
accacagtcgatgtcggttatggtgccaatattgcctacggcgaggtcacccgcccgatt
aaagatatggtagaaaaggcacaagagcttgatttagggggcatgcttgatgccgcagat
gagttcggtgggcctaacgccgggctggatgtttacgccaaaggtggaaccaaagagacc
agcctcagtagcaacacatccaccggaacatcaatcaaaggcggcgacattaacatcaat
gcgacgggcgcggtcaaagaccaagggactgaatatcaagcagataagggttccatcacg
ttgaatgccgccagccacacttctgaagcggcggttaatcgagtggaacagcacatcaaa
gaaacctctggcggcgctgatattcgaatttataccaccacgggtaaagacattaccgtt
gatggcaaaggcaaaggcggatctaaagttcagcttgtcacaggtgaaattgcgcaagtt
ggcagcatgaacgcagcaaatggtatcaatatcaatgttaaagaagatgctatttatcaa
ggcaccaatatggatgcaggggatggcaaaatctcggtcaatgcgggcggcgatattcgt
tttgatcaagtcaccaacctgaccagtgaaagccataataacgttgatgttaatgccaaa
atgaatctcggcaccaacaccaacagcaaagaatttggtgccggattaggcggtgggcac
agtaaaggcgaaagcagcacgtctattgcccaagtcagcaatcttcaaggtcaacaaggg
gttgaactgaatactgggaaagatctaacactgacgggcacatcattcggcagcaaagaa
aaggccacgggtgatgttctgctggcagctgctggcaaagtcgatattaaagctgctgaa
tctcaggggtcaaaacaggatatgacctggtcagccagcgccaatgcgggtatcagtaaa
agtaaaggcacggataatggcaaaggaattagcgcaggtatgcaagtcgatgtcgccaaa
acagacgagtcggccacgaaataccaagggagcgttatcaatagctccggggcattgacg
gttaaagcaggcagcgctgataagcaagccattcacatgcaaaatacccatatcaatagc
caaaaaaccactctaacagcagataagggcggtattttgctggagtccgctcaggacaaa
gagcataagaataactggagctttggagtagaggccaatgcgcaacaaaacagcaccttt
aataaagatgataagggaattgcggataataaaagtaatgagaaaatccatgatatcgga
gccaagcttaaagttgacattgataatgtgaatgccataacacagcaaaacacccagata
aacagcgacaatattaatttgcataccgccaaagatctgatgctggcgggggctcagctc
aaagcagagcatattaatggcaatgttggcggtaatctggtcgtcgaaagccgtttagat
cagttgcataaagtcaatgtctcaaccgcgttgggtgccagtcacagtaacggaaaacag
gacagtctgaacactcaattggccgattccagcccaatcggctcagacaaggtcaagaaa
aaactagacaccaaatccaacaaactgttcgacaaaatcaaaaagcaatacgaccaaata
tccagcaaattcaccacgaaagaagaagataatgtcaaaactctcagttacaccaaagag
ggcaaaaaaatgaccttggacgaatcaacaagtgaggaagaaactaaagataaatggtgg
caaaaaggcgcaaaaaccgtcggtaacaaggtcaaaaacaaagtacaaaatgagtctgtc
aaaggtggcaatggcaaaggcaaaattgaagtagaagtcgttgaaaatgaagccgttgaa
gaacaatcctccattagcggtcaagaaacggttaacctgaaagttggtgggaaaacacaa
ctgattggcgggaaaatatctaaccagaacagtgatgtaacactggaaacccatggcctt
gagttacaagatatcaatggcaaacacactgagggcggagccaggataatggcctcttcc
aaagtgaccgaaatgattggcagtggactcagtgatttgaaagacggtaaaacgccggtg
cttggtgctcatggcggatctgaacagaaaaatgctatggccggggtgactcgaggctaa

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