Yersinia frederiksenii: AW19_2880
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Entry
AW19_2880 CDS
T03606
Symbol
iclR
Name
(GenBank) acetate operon repressor
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
yfr
Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yfr03000
]
AW19_2880 (iclR)
Transcription factors [BR:
yfr03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AW19_2880 (iclR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
MarR
HTH_Crp_2
Rrf2
Fe_dep_repress
DUF7343
HTH_20
DIP2311-like_C
TrmB
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
AJI88029
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Position
3128407..3129246
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AA seq
279 aa
AA seq
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MALPISIKRGKKPKAAAQTTPAATGQVQSLTRGLKLLEYISESQGSVALTDLAQQAGLPN
STTHRLLTTMQQQGFVRQVGDLGLWTMGAHAFIVGSSFLQSRNLLAMVHPMLRRLMDESG
ETVNLAVLDHSDYQAIIIDQVQCTALMRMSAPIGGKLPMHASGAGKAFLSTLSDEQLVQL
LHKKGLHAYTQHTRTSPASLKENLALIRKQGYSFDDEEHALGLRCIAACLFDEHHEAFAA
ISISGPVSRITDDRVTELGALVIHAAKEITQSYGGGSRG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcgctacctatttcgatcaaacggggaaagaaacccaaggcagccgcgcaaactacc
cctgcggcgacaggtcaggttcaatcattgactcgtggacttaaattactggaatatatt
tccgaatcgcaaggaagtgtcgcgctaacagatttagcccaacaggcaggtttacctaac
tcaaccacccatcgcctgttaactaccatgcaacagcaaggttttgtccgtcaagtgggt
gatttaggcctttggaccatgggcgcacatgcctttattgttggcagcagctttttgcaa
agccgcaatttgctggctatggttcacccgatgctgcgccgtttaatggatgaatccggt
gaaaccgtgaacttggcggtactggatcacagtgactatcaagccattattatcgaccaa
gtgcaatgtaccgcactgatgcgtatgtcagcgccgattggcggtaagctgcccatgcat
gcatctggggcgggcaaagcttttctctccaccctgtcagacgagcaactggtgcagctt
ttacataagaaagggctgcatgcctatactcaacacacccgcaccagtccagccagtctg
aaagaaaatttggccctgatccgcaagcaaggttattcatttgacgacgaagaacatgct
ctcggcctgcgctgcatcgccgcctgcctgttcgacgaacaccacgaagcctttgccgca
atttccatctccggcccagtatcgcgcattaccgacgatcgcgtcacagaacttggcgcg
ctggttattcatgccgcaaaagaaattactcaatcttatggtggtgggagtcgcggttaa
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