Yersinia frederiksenii: AW19_2902
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Entry
AW19_2902 CDS
T03606
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr00730
Thiamine metabolism
yfr01100
Metabolic pathways
yfr01240
Biosynthesis of cofactors
Module
yfr_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AW19_2902 (thiC)
Enzymes [BR:
yfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AW19_2902 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AJI86237
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All DBs
Position
3150733..3152763
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AA seq
676 aa
AA seq
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MSNNTIAKDLSRPRQSIPRKQQREQAQEFIDTLQGVTFPNSQRIYLQGSRPDIQVPMREI
QLSPTLIGGGKDSPHYEENEAIPVYDTSGPYGDPRAKLDVHAGLPKLRESWIADRQDTAA
LSSVSSGFTQQRLADEGLDHLRFEHLPRPKKALAGQCVTQLHYARAGKITPEMEFIALRE
NMGRERIRSEVLRQQHAGQAFGAHLPENITAEFVRQEVAAGRAIIPANINHPESEPMIIG
RNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPV
PIGTVPIYQALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLT
GIVSRGGSIMAKWCLSHHQENFLYQHFREICQICAAYDVSLSLGDGLRPGSIQDANDEAQ
FAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDI
APGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKG
HPGAQIRDNAMSKARFEFRWEDQFNLALDPETARAYHDETLPQESGKVAHFCSMCGPKFC
SMKISQEVRDYAAKQETAARQELAVVQETAAQHIEVLQSGMEQMSAEFRSRGSELYINKS
HHAPASLQAEANNEPV
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataatacaattgctaaagatttatcacgcccacgtcagtctattccacgtaaa
caacaacgtgaacaagcccaagaatttattgataccctgcaaggggttaccttccctaac
tcccaacgtatttatctgcaaggctcacggcccgatattcaagtgccgatgcgcgagatc
caactcagcccgacattgatcggcggcggtaaggactctccccactatgaagaaaatgaa
gccattccggtgtatgacacctccggcccttatggtgatccacgcgctaagctggatgtg
catgccggtttacccaaactgcgcgagagctggatagccgatcgtcaggataccgccgcg
ctctcctcggtcagttctggctttacccaacagcgcttggctgatgagggcttagaccat
ttgcgttttgagcatctgccccgccccaaaaaagcccttgcgggccaatgtgtcactcag
ttgcattacgcccgggcaggtaaaatcaccccagaaatggagtttatcgccctgcgggag
aatatggggcgtgaacgtattcgcagtgaagtattacgccaacagcatgcggggcaagca
tttggtgcgcatctgccagagaatatcaccgcagaatttgtccgacaggaagtggccgct
ggtcgagctatcatccccgcgaatattaaccaccccgaatctgaaccgatgattattggt
cgcaactttttggtgaaagtgaacgccaacatcggcaactctgccgtgacctcttccatt
gaggaagaagtggaaaaactggtgtggtcaacgcgctggggcgcggataccgtgatggac
ttatccactggccgctatattcatgaaactcgtgaatggatactgcgcaatagcccagtc
cccattggcaccgtccctatctatcaggcgctggaaaaagtcaatggcgtggcggaaaac
ctaacctgggaaatgttccgcgacaccctgctagagcaggccgagcaaggggttgattac
tttactattcatgccggtgtgctgttgcgctatgtgccgatgaccgctaaacggctgacc
ggtatcgtctcccgtggcgggtcaattatggcgaaatggtgcctttcccatcatcaggaa
aatttcctgtatcagcatttccgcgaaatctgccagatctgcgcggcttatgatgtttca
ttatcattgggtgatggtctgcgccctggttccattcaggatgccaatgatgaagcccaa
ttcgctgagctgcataccttgggcgaattgaccaaaatcgcctgggaatatgatgtgcag
gtgatgattgaaggccctgggcatgtgccaatgcagatgattcgccgcaatatgactgaa
gagctggagcattgccatgaagcgccattttataccttaggccccttgaccaccgacatt
gcccccggttatgaccattttacctccggcatcggcgcggccatgattggttggttcggc
tgcgctatgctgtgctatgtcacccccaaagagcaccttggtttacccaataaagaagat
gtaaaacaggggcttatcacttataaaattgcagcccatgcggctgatttagcgaaaggt
caccccggcgcgcaaatccgcgataacgccatgtcaaaagcgcgttttgaattccgttgg
gaggatcaatttaatttggctctcgaccctgaaaccgcgcgtgcttatcacgatgaaact
ctgccacaagaatccggcaaagtggcgcatttctgctccatgtgtgggccgaaattctgc
tcgatgaaaatttcgcaggaagtgcgcgattacgccgctaagcaagaaacagccgccagg
caagagttggcggtggtgcaagaaacggcggctcaacatatcgaagttttgcaatccggt
atggagcagatgtccgctgagttccgctcccgtggtagtgagttatatatcaataaatca
catcacgcccccgccagtctgcaagcggaggcgaataatgagccagtctga
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