Yersinia frederiksenii: AW19_2936
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Entry
AW19_2936 CDS
T03606
Symbol
fadB
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr00071
Fatty acid degradation
yfr00280
Valine, leucine and isoleucine degradation
yfr00310
Lysine degradation
yfr00362
Benzoate degradation
yfr00380
Tryptophan metabolism
yfr00410
beta-Alanine metabolism
yfr00640
Propanoate metabolism
yfr00650
Butanoate metabolism
yfr00907
Pinene, camphor and geraniol degradation
yfr00930
Caprolactam degradation
yfr01100
Metabolic pathways
yfr01110
Biosynthesis of secondary metabolites
yfr01120
Microbial metabolism in diverse environments
yfr01200
Carbon metabolism
yfr01212
Fatty acid metabolism
Module
yfr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AW19_2936 (fadB)
00650 Butanoate metabolism
AW19_2936 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AW19_2936 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AW19_2936 (fadB)
00310 Lysine degradation
AW19_2936 (fadB)
00380 Tryptophan metabolism
AW19_2936 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AW19_2936 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AW19_2936 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AW19_2936 (fadB)
00930 Caprolactam degradation
AW19_2936 (fadB)
Enzymes [BR:
yfr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AW19_2936 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AW19_2936 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AW19_2936 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AW19_2936 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AJI86335
LinkDB
All DBs
Position
3185127..3187316
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQSETLKLHWLENGIAELVFEAPGSVNKLDTKTVANLGEALIVLEKQSELKGLLLSST
KAAFIVGADITEFLSLFNAPPEKLHQWLVFANDIFNRLEDLPVPTLSAINGYALGGGCEC
ILATDFRVASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIIAKDALK
VGLIDAVVAPEKLADAALTMLKQAIDGKLDWKAARLPKLEPLKLNPTEAAMCFTIAKGMV
MQVAGKHYPAPLTAVKTIEAAAKLGRTEALKLETTSFVRLAGSNEARALVGIFLNDQYVK
GQAKKLSKGVSAPKQAAVLGAGIMGGGIAYQSALKAVPVIMKDINEKSLTLGMNEAAKLL
NKQLERGKVDGLKMASILATIQPTLDYTGIERAQVIVEAVVENPKVKAAVLAEVEALIGE
ETVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGAKTSDKTIAAVVAY
ATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFENQRFGQKNGQGFYRYTQDAKGKP
RKENDEQVDVLLAQVIQSVKKFSDEDIIARTMIPMINEVVRCLEEGIIASPAEGDMALVY
GIGFPPFHGGVFRYLDTIGSANYVEMAQRYVHLGALYHVPAGLRAKAEHNESYYPVATAL
PDISTSQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaagcgaaacattaaagcttcactggctggaaaacggcattgccgagttg
gtgtttgaagcaccgggttcagttaataaactggatactaaaaccgtagccaatctgggt
gaagccttgattgtgttggaaaaacaaagcgaactcaaagggttactattgagttcaact
aaggcggcctttattgttggcgctgatatcacagagtttctatccctgtttaatgcccca
ccggaaaaattgcatcaatggttggttttcgccaacgacattttcaatcgtttggaagat
ttaccggtaccgaccctatctgcgatcaatggatatgcgctgggtggcgggtgcgaatgt
attctggcaacagatttccgtgtggcttcaccagaagcacgtattggcctaccggaaacc
aagctcggaatcatgccaggttttggcggttcagttcgcttgccacggttattaggcgct
gacagtgcgttggaaattatcgcggctggcaaagatattattgctaaagatgctttaaaa
gttggtctgattgatgctgtcgtcgcccctgagaaactggctgatgcagctttaaccatg
ctgaaacaggctattgacggcaaacttgactggaaagccgctcgcctcccgaaattggag
cctctgaagctcaaccccactgaagccgccatgtgttttaccattgctaaaggcatggtc
atgcaagtagcaggtaaacactatccggctcccctgaccgcagtcaaaaccatcgaggcc
gccgcaaaacttggtcgaaccgaagcattgaagttggaaaccaccagttttgtccgttta
gcgggatccaatgaagcccgggcattagtcggtattttcctcaatgatcaatatgttaaa
ggacaggctaaaaaactgtccaaaggtgttagtgcaccaaaacaggccgcagtactgggt
gcggggattatgggcggtggaattgcctatcaatcagcactgaaagctgtgccagtcatt
atgaaagacattaatgaaaaatccctgacactggggatgaatgaggcggccaagttactg
aataaacagttggaacgcggcaaagtggatggtctgaaaatggcgagtatcttagcgact
atccagccaacacttgattacaccggtattgaacgcgcccaagtcatcgtagaagcggtg
gtggaaaatccaaaagtgaaagcggcggtgctggctgaagttgaagcattgatcggcgaa
gaaactgttttggcctctaacacctctacaattccgatcgatcaactcgctaaatccctt
aaacgcccagaaaacttctgtggcatgcacttcttcaaccccgttcatcgcatgccactg
gttgaaattattcgaggtgcgaaaacctcagataaaactatcgctgctgttgtcgcatac
gccacgcaaatgggtaaaaccccgattgtggtcaatgattgcccaggtttctttgttaac
cgcgttttattcccgtatctggccgggttcggtatgttagtcagagacggagcggacttc
cgccaaattgataaagtgatggaaaaacaatttggctggccaatgggccctgcctatcta
ttagatgtggtcggcattgataccgcgcaccatgcacaagctgttatggctgccggcttc
cctgaacgtatgaataaagattatcgcgatgcggttgacgtcatgttcgaaaaccaacga
tttggtcaaaaaaatggccagggtttctaccgttacacccaagatgccaaaggcaaaccg
cgtaaagagaatgatgaacaagtagatgtgttattagcacaagtcattcaatcagttaag
aaatttagtgatgaagatattattgcccgcaccatgatcccgatgatcaatgaagtcgtg
cggtgtctggaagaaggtattattgccagcccagctgagggcgacatggcgctggtgtat
ggcattgggttcccgccattccacggcggcgttttccgttaccttgacaccatcggcagt
gcaaattatgtcgaaatggctcagcgttatgttcatcttggtgcgctgtatcacgtcccg
gcggggctgagggccaaagctgaacataacgaaagctattatcctgtagcgacagcgctg
cctgatatttctaccagtcaaccggcatga
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