Yersinia frederiksenii: AW19_3074
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Entry
AW19_3074 CDS
T03606
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
yfr
Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yfr03016
]
AW19_3074 (trmA)
Enzymes [BR:
yfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
AW19_3074 (trmA)
Transfer RNA biogenesis [BR:
yfr03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
AW19_3074 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Cons_hypoth95
Methyltransf_4
MTS
Methyltransf_15
Methyltransf_11
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_12
PrmA
DREV
Motif
Other DBs
NCBI-ProteinID:
AJI88751
LinkDB
All DBs
Position
3338152..3339255
Genome browser
AA seq
367 aa
AA seq
DB search
MTPDILPTDGYEHQLAEKSARLQAMMSPFQAPEPQIFRSPAQHYRMRAEFRVWHDEDDLY
HIMFDQQTKQRIRVEQFPVASLLINRLMSVLMTAIRAEPILRRKLFQIDYLSTLSGKLIA
SLLYHRPLDEEWQQKARELRDQLREQGFDLQLIGRASKTKIMLDHDYIDEVLPVAGREMI
YRQVENSFTQPNAAVNIHMLEWAIDVTQHASGDLLELYCGNGNFSLALARNFERVLATEI
AKPSVAAAQYNIAANHIDNVQIIRMSAEEFTQAMQGVREFNRLKDIDLTSYNCETIFVDP
PRSGLDDETVKLVQAYPRILYISCNPETLCANLEQLQHTHKISRLALFDQFPYTHHMECG
VLLEKRD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgacatcctgccgactgacggctacgagcaccaattggcggaaaaatctgcc
cgtcttcaggcgatgatgtcgccgtttcaagcccctgaaccgcaaatatttcgttctccc
gcacagcattaccgcatgagagccgagttccgcgtttggcatgatgaagacgatttgtac
cacatcatgtttgaccaacaaaccaagcagcggattcgggttgagcaattcccggtcgcc
agtttgttaattaatcgtctgatgagcgtgctgatgactgccatcagagccgagccgatt
ttacggcgcaaactgttccagattgattacttatcgactctgagcggcaagctgatcgcc
tctttgctgtatcaccgtccattagatgaagaatggcagcagaaagcgcgggaactgcgt
gaccaattgcgtgagcaaggctttgatctgcaactgattgggcgggcgtcaaaaaccaaa
atcatgctggatcacgactatatcgacgaagtgctgccggttgccggccgtgagatgatt
tatcgtcaggttgagaatagcttcacccaacctaatgctgcggtgaatattcatatgctg
gaatgggcgattgatgtcacccaacatgccagcggcgatttattggagctatattgcggc
aacggtaatttctcgctggcattggcacgtaattttgaacgcgtattagcgactgaaatc
gccaaaccgtcagtggcggcggcgcaatacaacattgccgccaatcatatcgacaacgtg
caaattatccgtatgtccgcggaagagtttacccaagccatgcaaggtgtgcgtgaattc
aaccgactgaaagatattgatttaactagctataactgcgaaaccatttttgtcgaccca
ccgcgcagtgggttggatgatgaaaccgtcaagttagtacaagcttatccgcgcatcctt
tatatctcttgtaatccagagaccctgtgcgccaatttggaacagctgcaacatacccat
aaaatcagccgattagcgctatttgatcaattcccttacacccatcatatggaatgtgga
gttttgttggaaaaaagagactga
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