Yersinia frederiksenii: AW19_3158
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Entry
AW19_3158 CDS
T03606
Name
(GenBank) exonuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr03030
DNA replication
yfr03430
Mismatch repair
yfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AW19_3158
03430 Mismatch repair
AW19_3158
03440 Homologous recombination
AW19_3158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yfr03032
]
AW19_3158
03400 DNA repair and recombination proteins [BR:
yfr03400
]
AW19_3158
Enzymes [BR:
yfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AW19_3158
DNA replication proteins [BR:
yfr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AW19_3158
DNA repair and recombination proteins [BR:
yfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AW19_3158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RhoGEF67_u2
Motif
Other DBs
NCBI-ProteinID:
AJI85698
LinkDB
All DBs
Position
3423390..3424034
Genome browser
AA seq
214 aa
AA seq
DB search
MNSNNPLSRLACAFRRSIVKAGKTLCKLNAKQRAQRWLKNNYLILDTETTGLGDDAEIIE
ISIIDCTGKILLDTLVKPLKSIPAAATAIHGITNEMVANAPTWKDIHHQFVALSNDRTLL
IYNASFDSRLIFQTAAANNCPVPEKKYIFDAECVMKTYAEYYGQWDQKRNKFKWQRLSNA
AEQQGVAIDGTPHRALADCKTTLGVIQAIAGVRS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
ttgaattctaataacccactatctaggctagcgtgtgcttttaggcggtctattgttaaa
gccggaaaaacactctgcaaattaaacgccaaacaacgcgctcaaagatggctaaaaaat
aactatcttattttagacacagaaacaacgggccttggtgacgatgctgaaataattgaa
atcagtatcattgattgtaccggtaagatattgctggatacgctggttaaaccattaaaa
tccattcccgcagcggcaaccgccattcatggaatcactaatgaaatggtagcgaacgcg
ccaacatggaaagatattcatcatcaatttgtggcactaagcaatgaccgcaccttgctt
atttataatgcctcttttgattcccgcttaatttttcaaacagcagcggctaataattgc
ccggtgccagagaagaaatatatttttgatgctgagtgcgtcatgaaaacctatgcggaa
tattacggccagtgggatcagaagcgaaataaatttaaatggcaaagactgagcaatgca
gccgaacaacagggcgttgccattgatggtacgccgcaccgcgcacttgccgattgtaaa
acaacgctaggtgttatccaggctatagcaggggtgagatcatga
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