Yersinia frederiksenii: AW19_3297
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Entry
AW19_3297 CDS
T03606
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
yfr
Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yfr03032
]
AW19_3297 (gyrB)
03400 DNA repair and recombination proteins [BR:
yfr03400
]
AW19_3297 (gyrB)
Enzymes [BR:
yfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AW19_3297 (gyrB)
DNA replication proteins [BR:
yfr03032
]
Prokaryotic type
DNA Topoisomerases
AW19_3297 (gyrB)
DNA repair and recombination proteins [BR:
yfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AW19_3297 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
DUF6865
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AJI88660
LinkDB
All DBs
Position
3564237..3566651
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AA seq
804 aa
AA seq
DB search
MSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEII
VTIHSDNSVSVQDDGRGIPTGMHDEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELVIRREGKVHEQTYKMGVPQAPLKVVGETDQTGTTVRFWPSFQTFTNNT
EFQYEILAKRLRELSFLNSGVSIKLKDKRNDREDHFHYEGGIRAFVEYLSKNKNPIHPKV
FYFSTVKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNSYMDKE
GYSKKAKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVETLMNEKLVEY
LLENPTDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVFIAQPPLYKVKKG
KQEQYIKDDDAMEQYQMTLALDGAALHINADAPPLVGEHLEKLVAEHYSVQKTIGRMERR
YPRALLNNLIYQPTLQEEDLTDKEVVTQWIDSLVVLLNEKEQHGSSYSSVVRENRERQLF
EPVLRIRTHGVDTDYDLDFDFIHGGEYRKICLLGDKLRGLVEEGAFVERGERRVPVSSFE
DALDWLVKESRRGLAIQRYKGLGEMNPEQLWETTMDPTSRRMLQVMVKDAIAADQLFTTL
MGDAVEPRRAFIEENALRAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatacttatgactcctcaagtatcaaggtattaaaagggctggatgcagttcgt
aagcgtccgggcatgtatatcggtgatactgatgacggtaccggtctgcaccacatggta
ttcgaggttgtggataacgctatcgacgaagccctcgctggtcactgtaaagaaattatt
gtcaccatccattcggataactcggtttctgtacaggatgatggccgcggtattccaacc
ggtatgcatgacgaggaaggggtatcggcagctgaggtcatcatgaccgtgttgcatgct
ggcggtaaatttgacgataactcgtataaagtttccggcggtttgcacggcgtgggtgtc
tcagttgttaacgccttgtctgaaaaactggagctggtgattcgccgtgaaggtaaagtt
cacgagcagacttacaaaatgggtgtgccgcaggcaccactgaaagtggtgggtgaaacc
gatcagaccgggacaaccgtgcgtttctggccgagtttccagaccttcaccaataacacc
gaattccagtatgaaatcctggctaaacgcctgcgcgagttgtcattcctgaactctggg
gtttcaattaaactgaaagacaaacgtaacgatagagaagaccatttccattatgaaggt
ggtattcgggcgtttgttgaatatttaagcaaaaacaaaaacccgatccatccgaaagtg
ttctatttctctaccgtgaaagacgatatcggtgtggaagtggcattgcagtggaacgac
ggtttccaggaaaacatttactgcttcaccaacaacattccacagcgcgatggggggact
cacttagtggggttccgtacggcgatgacccgtaccctgaacagctacatggataaagaa
ggctacagtaaaaaagcgaaaatcagtgccaccggtgatgatgcccgtgaaggcttgatt
gccgtggtttccgtgaaagtaccagaccctaaattctcctcacagaccaaagataaactg
gtctcctctgaggtgaaaacggcggtcgaaacgctgatgaacgagaagctggttgagtat
ttgctggaaaacccaactgacgccaaaattgtcgtgggcaagattattgatgctgcccgt
gctcgtgaagcggcacgtaaagcgcgtgaaatgacgcgtcgtaaaggggcgttggacttg
gctggtttgccaggcaaactggctgactgtcaggaacgcgacccggcattgtccgaactc
tacttagtggaaggggactctgcgggcggctcagctaaacagggccgtaaccgtaaaaat
caggccattttgccgctaaaaggtaaaatcctgaacgtcgagaaagcgcgctttgacaaa
atgctttcttcacaagaagtggcaacgctgattaccgcgctgggttgtggtattggccgg
gatgaatataatccggacaaattgcgctatcacaatatcattatcatgaccgatgccgac
gtggatggttcgcacatccgtacgttgttgttgaccttcttctatcgtcagatgccggaa
attattgagcgtggtcatgtgtttatcgctcagccgccactgtataaagtgaagaaaggt
aagcaagagcaatacatcaaagatgatgacgcgatggagcagtaccagatgactctggca
ctggatggcgcggctttgcatatcaatgctgatgccccaccgctggtgggcgaacatctt
gagaaactggttgccgagcactacagcgtccagaagactattggccgtatggaacgtcgt
tatccgcgtgctttgctgaataacctgatttatcagccaaccttgcaagaagaggatttg
accgataaagaggttgtgacgcaatggattgattcgctggtggtgttgctgaacgagaaa
gaacagcacggcagcagctacagttcagtggtgcgcgaaaaccgtgagcgtcaactgttc
gagccggtgctgcgtattcgtacccacggggttgataccgattatgatctggactttgat
ttcatccacggtggtgagtatcgcaaaatctgcctgttgggcgataaactccgtggctta
gtcgaggaaggtgcttttgttgaacgtggcgagcgccgtgtgccggtttcaagctttgaa
gatgcactggactggttagtgaaagagtctcgtcgtggtttggccatccagcgctataaa
ggtttgggtgaaatgaacccagagcagttgtgggaaactaccatggacccaaccagccgc
cgtatgctgcaggttatggtgaaagatgccattgctgccgatcagttattcaccacgctg
atgggggatgcggttgaacctcgccgtgcctttatcgaagagaatgcgttgcgcgcagcg
aatatcgatatctaa
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