KEGG   Yersinia frederiksenii: AW19_3337
Entry
AW19_3337         CDS       T03606                                 
Name
(GenBank) helix-turn-helix family protein
  KO
K15773  HTH-type transcriptional regulator / antitoxin HipB
Organism
yfr  Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:yfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:yfr03000]
    AW19_3337
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:yfr02048]
    AW19_3337
Transcription factors [BR:yfr03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    AW19_3337
Prokaryotic defense system [BR:yfr02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HipA-HipB
    AW19_3337
SSDB
Motif
Pfam: HTH_3 HTH_26 HTH_37 Josephin DUF473 HTH_31 MqsA_antitoxin HTH_92
Other DBs
NCBI-ProteinID: AJI87957
LinkDB
Position
3615059..3615340
AA seq 93 aa
MRTLTEIAEEIKGIRQQQKLKQSDMRLVNGMTQQQVSKFEKGGDINLSTLLRILDGFNLE
MVFVTREQARELRQGLNSISMAEIEKNGEHSNP
NT seq 282 nt   +upstreamnt  +downstreamnt
atgagaacattgacagagattgcagaggaaataaaaggtatccgtcagcagcagaaactc
aaacaatctgatatgcggctggttaatggcatgacgcaacaacaggtttctaagtttgaa
aaaggcggagatatcaatctttccactctgctgcgtattctggatggttttaatttggaa
atggtcttcgtgacgcgtgaacaagctcgggaattgcgccaagggctgaactcgataagc
atggcagagattgaaaagaacggcgagcatagcaacccatag

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