Yersinia frederiksenii: AW19_3347
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Entry
AW19_3347 CDS
T03606
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter, D-xylose-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
yfr
Yersinia frederiksenii
Pathway
yfr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AW19_3347 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yfr02000
]
AW19_3347 (xylF)
Transporters [BR:
yfr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
AW19_3347 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AJI86356
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All DBs
Position
3624562..3625557
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AA seq
331 aa
AA seq
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MKFKNILLSACAALVMFSQPGFSKEIKIGMAIDDLRLERWQKDRDIFVNKAESLGAKVFV
QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVIAEAKREGIKVLAYDRMINNAD
IDFYISFDNEKVGELQAKSLVERVPQGNYFLMGGSPVDNNAKLFRQGQMTVLNPLIKEGK
IKIVGDQWVDAWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALAAQGLAGKVA
ISGQDADLAAIKRIVAGTQTMTVYKPISKLANDAAEIAVSLGKGEAPKANSQLNNGIKDV
PAYLLTPIQVDKNNIDSTIIADGFHKKADVY
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaagaacattttactctccgcatgcgccgctctggtaatgtttagccagccc
ggattcagtaaagaaattaaaatcgggatggcgatagacgatcttcgtcttgaacgttgg
cagaaagaccgcgatatttttgttaacaaagctgagtccctcggcgctaaagtatttgtt
caatcggcaaatggcaatgaagaaacccaaatgtcacagattgaaaatatgattaaccgt
ggtgtcgatgtgctggttattattccttataacgggcaagtattaagtaatgtgatcgcc
gaggcaaagcgagaaggtataaaagtattagcttatgaccgtatgataaataatgctgat
attgatttttatatctccttcgataatgaaaaagtgggtgagttacaagctaaaagtttg
gttgagcgggtacctcagggtaattatttcctgatgggtggctcgccggtcgacaacaat
gccaaactgttccgccaggggcagatgacagtgcttaatccattgataaaagaagggaaa
ataaaaattgttggtgatcagtgggttgatgcctggttaccggaaaatgccttaaaaatc
atggagaatgctctaacagctaacaataacaaaattgatgctgttgtggcgtctaatgat
gccaccgccggtggggctattcaggcgttagcagcacaaggactggcgggcaaagtggct
atttctgggcaggatgctgatttagcagcaataaaacgtattgttgcgggcacccaaacc
atgaccgtatataaacccatcagtaaattagccaatgatgccgcagaaattgctgtgtct
ttgggtaaaggcgaagcgccgaaagcaaatagtcaattaaataacggaataaaagatgtc
ccagcttatttactgacaccgattcaagtggataaaaacaatatcgacagcacaattatt
gctgatggtttccacaaaaaagctgatgtttattaa
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