Yersinia frederiksenii: AW19_3814
Help
Entry
AW19_3814 CDS
T03606
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yfr
Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yfr03016
]
AW19_3814 (truB)
Enzymes [BR:
yfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AW19_3814 (truB)
Transfer RNA biogenesis [BR:
yfr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AW19_3814 (truB)
Prokaryotic type
AW19_3814 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AJI86864
LinkDB
All DBs
Position
4106512..4107456
Genome browser
AA seq
314 aa
AA seq
DB search
MGRPRRRGRDINGVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVVARLGQRTDTSDAEGALISEREVNVTQAQMDAALDSFRGDSQ
QVPSMYSALKHQGKPLYEYARQGIEVEREARSITVYELLFIRWEGNDLELEIHCSKGTYI
RTIVDDLGELLGCGAHVSYLRRLQVATYPSDRMVTLEQLTAMVEAAQAAERSPNAELDAL
LLPMDSAVLNFPEVNLLPAVAAYIKQGQPVHVAGAPGEGMVRITEGEERNFIGIGTIAED
GRVAPKRLVVEYAE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtccacgtcgtcgcggccgtgacattaacggcgttctgttattggataagccg
ctgggcctctcctctaatgacgttttacaaaaggtaaaacgcctctttagcgcaaaccgc
gcaggtcatactggtgcacttgatcctttggcgaccggtatgttgcctatctgtctgggt
gaagcgaccaagttttcccaatttttgctagattcagataaacgctatcgtgttgtggcc
cgtttaggtcaacggactgatacctcggatgccgaaggcgcattaatcagcgagcgggaa
gttaatgtcacgcaggcgcagatggatgccgctctggacagtttccgtggtgatagccag
caagtgccatccatgtattctgcgttgaagcatcaaggcaagccactgtatgaatatgcc
cgtcaggggattgaagtagagcgcgaagcgcgcagtattactgtgtacgagctgctcttt
atccgctgggaaggtaatgacctagagctggaaattcattgctctaaagggacttacatt
cgcaccattgttgatgatttgggtgaattgttgggttgcggcgcgcatgtcagttatttg
cgccgtttgcaggtagcgacttatccaagtgatcgtatggtgactttagagcagttaacg
gcgatggttgaagcggcacaagcagcagagcgttcgccaaatgcggaactggatgcgctg
ctattgccgatggacagtgcagtattaaatttccctgaagtcaatctgttacctgctgtt
gctgcttatataaaacaagggcagccggtgcatgtagccggtgcgccaggcgaaggaatg
gttcgtatcactgaaggtgaagagcgtaatttcattggtattggcaccattgcagaagat
ggccgagtggctcctaagcgcttggttgtggaatatgctgagtag
DBGET
integrated database retrieval system
