Yersinia frederiksenii: AW19_3873
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Entry
AW19_3873 CDS
T03606
Name
(GenBank) hypothetical protein
KO
K15125
filamentous hemagglutinin
Organism
yfr
Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
yfr00536
]
AW19_3873
Glycosaminoglycan binding proteins [BR:
yfr00536
]
Heparan sulfate / Heparin
Microbial pathogens
AW19_3873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
TPS
PT-VENN
ESPR
Fil_haemagg
Cytotoxic
Motif
Other DBs
NCBI-ProteinID:
AJI85779
LinkDB
All DBs
Position
complement(4170712..4180026)
Genome browser
AA seq
3104 aa
AA seq
DB search
MNKNLYRIVFNKARGLLMVVADIAASGRAASSPSSGVGHTQSRRLSALSTLSFSLLLALG
CVSLPALSAIVADASAPGNQQPTIISSANGTPQVNIQTPSSGGVSRNLYSQFDVDNRGVI
LNNGQGVNQTQLGGFINGNPSLARGEASIILNEVNSRDPSKLNGYIEVAGRKAQVVIANP
SGITCEGCGFINANRATLTTGQTQLNNGQLTGFDVDRGEIVIQGKGLDSSRQDHTDLIAR
SVKVNAGIWANDLKVTTGRNQVDAAHQNSNAKAADGSARPTVAVDVANLGGMYAGKIRLI
GTESGVGVRNAGEIGASAGDITITADGMLMNSGQINSVQHLAVNAAAGIENAGVLYAQGN
TQLTTAGKLSNSGTIAAAGDTSLRAAEVNSNRNSMLGAGVKSDNSNITSGTLRVDASGKL
TAQGKNISGTTQNFTAHSIDLSGSQTQSRDLTLTAQNGDINLTGANLSASRQLSASTAFL
LRTDNASLIADQLKLSAQALSNVGGLIAQTGTTDFNLNLPGYVDNRGGSLLSAGKFLLQA
ESVNSNGNSQLGAGVQSNGKLAQSGDLNVTTRQALIAQGQNVAVGAMTLSGSRVDLTGSQ
TSASNIAITARDGDISTQKATVLTPGALTITAAVNPAQTLNNNGGKLHADTLELKLAKLD
NSNGEIAAATDLWIRLQSDFTHQTGARVTAGRDLVFNTSGTLINQYKLEAGRDMQLTALS
ISNTNDSSALLAGRNLSLSTNGLFNSGAIYAAGVGQLTVNGKAENRGEIYTEQQLTFTTT
GNLDNRGVMQTRGNMQLSTQRDLNNSGTLYSAGDQMQLSVTGDLTNQGKLHAANGDLLLL
TNGNLDNSGSFYGAGNSLFTTQGNVLNSGSIYTQGTLQWQIAGRAQNSGSIAALGDLQLR
ANDLLSTHQSLIAAGLKADGNLANSGDLAIHTEHALIAQGQNIAAGALALAGSQLDLTGS
QTQANAITLTAKSGDITLTGAVVKAVMRLSASTNGLLRSDKANLMAEQITLAAQALSNLG
GVIAQTGIMDFTLNLAGYLDNRAGTLLAKGHVTVQAERLDSDGDSLLGAGVQSNGRLTDA
GDLRVTTRQELVAQGQNIAAGAMTLTGSRIDLTGSQTQAREINITANKGNVSTQRANILS
LGSLTMNAGANAGQTLNNQSGTLAANNIQLNLGQFDNRSGKVTASQDLTIGLQSDFNHLA
DSTLQAGRDLTFITNGALTNDGQLLAGGKLSTRSSSLLNNGNIIATQAGLTTTGALINHG
EILTSGRLDTDSTTLFNSGAIISAEATLKARQSITNSGPNALIGATDENGTLALLAPVIE
NSDTVTNTDTAPSTTLLGMGKIILAGALDQSGNYLSAAQVLNISGLIESGKDMLIYATTL
TNRRHILTANTDFVVADTVNGTAYWTAENPDIPGGRYAEPPHGGSMNSDYIGTNYTSTIA
YNGIDQISPEAQLLAGGNLTPQVGTLENFWSKVSAQGEIDLSGVTLQQDGWGSAQRLIEK
TTSSGEWRYRTYKGDLWGIGWGPEVSELATHQYASSITAKTLSGSGTIIHNGANPGAIAP
PSGSDSTGKNIAIEFNGISLTLPSGGLYQLNTDQGQYAPDPDGELSLEAINNPSANVDRS
GLSAPDRAVSGGYLVETHPAFANLNNWRGSDYVLQQLNNNPDVIFKRLGDNAYEQRLVRD
QVLALTGQAVASDYRSAQEQFEQLFAAGLEYSKAFNIALGTHLSAEQMAALTSNIILMET
REVAGQTVLVPVVYLAGIKPGELHANGALIAADNITLTNVQGFTNSGAIKATNDLQISMA
QDITLNNRGGLLQAGNTMLLSTLNTDIDLTSARLNATNLQLDSGRDVILRTSSEQLSSSN
GSVLRNQTILGPLASINVSNNAVINTGRDFILQGAGLNVGQDLQVNTGGDWLLNTVQTRD
QISANYGSGSASSEHIRHLGSEVNVGGALTANVNNLTAVGANINAGTIDVQAQNINLSAA
TDSLQVSGESSSKRHTSSVELYDETLRGSQLNATGDIHLQTAKDITLSASAIQTDGALTL
AAGGDVTLTAQTEQHDEQRNHTGTKKGLASSTTTRSEDSISQTLAVGSMLSAGSLDVSGK
NIAVIGSNVVADKDINLRAKENLTVGSAQQSESESHLYEQTKSGLMSAGGMGVMAGSSST
KVTDTGKSLSNVGSTVGSVLGNVSMTAGEDLTVQGSDVLAGKDINLSGKSVSILAAENHS
SQTHSVEQKSSGLTLALSGAVGSALNTAATTAKEARDESNGRLAALQGVKAALSGAQAVQ
AGQLVQAQGGDAASMVGVSASLGSQKSSSQQHQEQTSVTGSTLTAGNNLTVTATGEGNSG
DILVQGSQLKAGGDTTLDAARDLLLLGAANTQKTDGSNSSSGGSVGVSLGLNGASSGLSI
FANANKGQGNEHGNGTTWTETTLDSGGTLSLNSGRDTSLIGAQASGESVKVDVGRDLLLQ
SQQDSDNYDAKQTSSSGGVSVAVTGGGSANLSMSQDKLHSNYDSVQEQTGIFAGAGGFDI
TVGEHTQLDGAVIASTADQSKNSLDTGTLGFSDIENKADFNAEHQGGSLSSGGPVGSDLL
SNLGGVVLSGLGNDGHAGGTTQAAVSEGNITLRDTDKQQQNVDDLSRDTDHANGSIGPIF
DKEKEQNRLKEAQLIGEIGGQAMDIARTQGDILGLEEALKRHPELKGDADALRETPEYKA
EMQKYGTGSALQQGLQAATAAIQGLAGGNMAQALAGASAPYLAEVIHNMTTDANGKVNTE
ANLMAHAVLGAVVAQINGNSALAGASGAAMGEYIAQQMYPGIKREDLTEEQRQTISALGT
LAAGLAGGLTGDSTADTVAGAQAGKNAVENNSLSGDKSRETVKQAAESLKNQVRDKLGEG
TTSSIANGIINALADTGDATLGSVDYVADAAMALASCAAGDSYCTQALNDLAGKNQAAAD
TLKTLMKSETWTAVAGQVKEAAQGNQLALEATGGMLAGLFLPGKKLPDVVKLIDSNIKIV
TGVTVGTFEKSLVGLPPGERVAIIKQTAPKVAAEYGMVKDNQLTKNNGRDVYRGQDGNLY
ALDTQHGRFEVVSPKGKHLGEVDFSMQKIPNSQDKSGSHNLKVK
NT seq
9315 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaacctataccgtatcgtgttcaacaaggcgcgtggcttgttgatggtggtg
gccgatatcgccgcctccggtcgggcggcttcctcgccctcgtcaggtgttgggcatact
caaagccgccgtctcagtgccttatcaacattgagtttcagtctgctattggctttgggt
tgtgtctctttacccgccctgtccgcgattgtcgccgatgccagtgcgccggggaatcag
cagccaaccattatcagcagcgccaacggtacgccgcaggtcaatattcagacgcccagc
agtggcggggtttcgcgtaacctttacagccaatttgatgtcgataatcgcggcgtgatc
ctcaacaacggccagggtgtcaaccagacccagctcggcggttttatcaacggtaacccg
tcgctggcgcgcggtgaagccagcattattctcaacgaagtcaacagccgtgacccgagt
aaactcaatggctatatcgaagttgcaggccgcaaagcgcaggtggttattgccaaccca
tcaggcattacctgtgagggctgcggctttatcaacgccaaccgtgcgaccttaaccacc
ggtcagacgcagcttaataatggccagctcaccggctttgatgtggatcgcggtgaaatt
gttattcaaggcaaaggtctagacagcagccgtcaagaccataccgatcttatcgcccgc
tctgtcaaagtgaatgcgggtatctgggccaatgatttgaaagtcaccaccgggcgcaat
caggtagatgccgcccatcagaatagtaacgccaaagccgccgatggcagcgcccgccct
actgtggcggtggatgttgccaatttgggtggcatgtacgctggtaaaattcgcttgatc
ggcactgaaagcggtgttggtgtgcgtaatgccggtgaaataggcgcatcagcgggcgat
atcaccattacggctgacggcatgctgatgaacagcggccagatcaacagtgtccagcac
ttggcggtgaatgccgctgcgggcatagagaatgccggggtgctctatgcgcagggcaat
acccagctcactactgcgggtaagctgagtaacagtggcactatcgcggcggcgggtgat
acctcattgcgtgcggcagaggtgaacagcaaccgcaactctatgttgggcgcaggggtc
aagtcggacaacagcaacattaccagcggcaccttgcgcgttgacgccagtgggaagtta
accgcccaagggaaaaatattagcggcacgacgcagaatttcactgcgcacagtattgat
ctgagtggcagccaaactcagagccgagacctgacactcaccgcccaaaatggagacatt
aatctcactggcgcaaatctgtccgccagccgtcagctgtctgcctcgacggcttttttg
ttacgaacggataacgccagcctgattgcggatcagctcaagcttagcgcccaagcactc
tccaatgtcggcggcctgatcgcgcaaaccggcaccaccgatttcaacctgaatcttccg
ggttatgtcgataaccgtggcggctccctcctgtctgccggtaaattcttgctgcaagcc
gaaagcgtgaacagcaacggcaatagccagctgggcgcaggtgtacagagcaatggcaaa
ctggcccaaagtggagatcttaatgtcaccacgcggcaagctttgattgctcaggggcaa
aatgtggcggtgggggccatgacattatccggtagccgtgtcgatctcaccggtagccag
acttctgcgagcaatatcgccatcactgcgcgtgacggcgatatttctacgcaaaaagcg
acggtgctcactcccggcgctcttaccatcactgcagcggtaaatcctgcacaaacgctg
aataacaacggcggcaaattacatgccgacaccctcgaactcaagctggctaaattagat
aacagcaacggggagatagcggcggcgaccgacctgtggatacggctgcaaagtgatttc
actcaccagaccggcgcgcgtgtcacggcaggtcgtgacctggtctttaacaccagtggc
acactgattaaccagtataaactggaagccgggcgcgatatgcagctcaccgcgctcagc
atcagcaacaccaatgacagcagcgccctgctggccggtcggaacttgtcattaagcacc
aatggcctgtttaacagcggcgctatttatgcggccggtgtcgggcaattgacggttaat
ggcaaggctgaaaaccgcggtgagatttacaccgaacagcagttaactttcaccaccacc
ggcaatttggataaccgcggtgtgatgcaaactcgcgggaatatgcagttatcgacgcag
cgcgacctcaataacagtggcacgctgtacagcgctggtgaccagatgcaactgtcagtc
accggcgacctgaccaaccaaggcaagttgcacgccgccaatggcgacctgctgctgttg
accaacggcaatctggataacagcggtagcttctatggcgcagggaacagtctgtttacg
actcaggggaacgtacttaacagcggctcgatttacacccaaggcacgctccagtggcag
atagctgggcgagcacagaacagcggttccatcgccgcgctgggtgacctccaactgcgg
gctaatgatttactcagcacccatcaatccctgatagcagctggattgaaagcggatggt
aaccttgccaatagtggcgatttggctatccatactgagcacgctttgatagcgcaaggg
caaaatatcgccgcaggggcattggcgctggcgggtagccagcttgatttaaccggcagc
caaactcaggccaacgccattaccctcacagctaaatccggggatatcactttaactggg
gcagtggttaaagccgtcatgcgcctgtctgccagcactaacggcctgctgcgcagcgat
aaagctaacctgatggcggagcagataacactcgccgcgcaagcactctccaacctcggc
ggggtgatagcacaaaccggtatcatggatttcactctcaatctggccggttatctggat
aaccgcgccggcacgctgcttgccaaaggtcacgtgacagtacaggcggagcgtctggat
agcgacggcgacagtctattgggggcgggagtgcagagtaatggccgcctgactgatgcc
ggtgatctgcgggtgaccacccgtcaggagttagtggcgcaagggcaaaatatcgccgca
ggggcgatgacgctaacgggtagccggattgatttaaccggcagccaaacacaagccaga
gagataaacatcaccgccaacaaggggaatgtcagcacgcagcgcgccaatatcctctcc
cttggctcgctgaccatgaatgccggtgcaaatgcagggcaaaccctcaataaccagagt
ggcacgctggcagcaaataatatccaattaaatttgggtcagtttgataaccgcagcggc
aaggtgaccgccagtcaggatctgactattggcttacagagcgatttcaatcatctggcc
gattcaacacttcaggctgggcgtgatttaacctttatcaccaatggggctttaaccaac
gacgggcagttattggcgggtggcaaactcagcacccgttcgagcagcttactgaataac
ggcaatattatcgcgacgcaagccgggctaaccaccacaggtgccttgattaatcacggc
gaaatattaaccagcgggcggctcgataccgactccaccaccctgttcaatagcggcgcc
attattagcgcagaagccacactcaaagcacgtcaaagcatcactaactccggccctaac
gccttgatcggcgcgaccgatgagaacggcaccttagccttgctggctccggtgattgaa
aacagtgataccgtcaccaacaccgacaccgccccgagcaccaccctgttaggcatgggc
aagattatcctggcgggcgctctggaccagagtggtaattatctgtcggccgctcaggta
ctcaatatttctggcctgattgaatccggcaaagatatgttgatttacgccacgacactg
accaatcgtcgtcatattctcaccgccaatactgactttgtcgtcgcggatacggtgaat
gggactgcttactggacagccgaaaaccccgatattccaggtgggcgctatgcagaaccg
cctcatggcggctcgatgaacagcgattatatcggcacgaattatacgtcgaccattgcc
tataacggcatcgatcaaatcagcccggaagcacagttgttagccggtggaaacctgacc
ccgcaggtcggcacgctggaaaacttctggagcaaagtgagcgcgcaaggcgagattgat
ctctccggtgtcaccctgcaacaagatggttggggcagcgcacaacgtctgatagaaaaa
accacctccagcggtgagtggcgctaccgtacctacaaaggcgatttgtggggcatcggt
tgggggccggaggtgagtgagctggccacccaccaatatgcctcgagtatcaccgcaaaa
accctcagcggcagtggcacgattattcataatggcgccaaccccggcgcgatcgcccca
ccgagtggcagcgacagtaccgggaaaaatatcgccatcgaatttaacggtatttccctg
acactccccagcggtgggctatatcagctcaacactgaccaaggtcaatacgcgccggat
cctgacggggaactctcgcttgaggctatcaataacccatccgccaatgtggacagatct
ggcctctccgcccctgatcgtgcggtgagcggcggctatctggtcgaaacccacccggca
tttgccaatctgaataactggcgcggctcggactatgtgctccagcagctcaataacaac
cccgatgtgatattcaaacgtctgggggataatgcctatgaacaacgtctggtgcgcgac
caagtgctggcattgaccggtcaggcggtcgccagtgattaccgcagcgcccaggagcag
ttcgagcaactgtttgcggcggggcttgagtacagcaaggcgttcaatattgccctcggt
acccacctcagtgccgagcagatggcggcactgaccagcaatatcatcctcatggaaacc
cgtgaagtcgccggacaaaccgtattagtcccagtggtctatctggcggggattaaaccg
ggtgagttgcatgccaacggcgcattgattgcggctgacaatatcaccttaacgaatgtg
cagggtttcactaactcgggggcgattaaagccaccaatgacctgcaaatcagtatggcg
caagacatcacgctcaataaccgtggcggcctgcttcaggcgggcaatactatgctgctc
agtaccctgaacactgatattgacctgaccagtgcgcgactcaatgccaccaacctgcaa
ctggacagtggccgcgatgtcatcctgcgcaccagcagtgaacaactcagtagcagcaat
ggctcagtgctgcgtaatcaaaccattttggggccgctggcgagtatcaatgtcagcaat
aacgcggtgattaataccgggcgcgattttatcctacaaggtgccggcctcaatgtcggt
caggatttgcaggtcaataccggcggtgactggctgctcaatacggtacaaacccgcgac
cagataagtgcaaattatggcagtggcagcgcgagcagtgagcatatccgccatctgggc
agtgaggtcaatgtcggcggtgcgctaaccgccaatgtcaataatctgaccgcggtgggg
gccaatatcaatgccggcactattgatgtgcaggcgcaaaatattaacctcagcgccgcc
accgacagcctgcaggtcagcggtgaatcctcaagcaaacgccataccagctcagtggag
ctttatgatgaaaccctgcgcggcagccagttaaacgccaccggcgatatccatttgcag
acggcaaaagacatcaccctcagcgccagcgcgatacaaactgacggcgcgctgacactg
gcggcgggcggcgatgtcaccctcaccgcccagactgaacagcatgatgagcagcgcaat
cataccggcactaaaaaagggctggcctccagcaccaccacccgcagcgaagacagtatt
agccagacgctggcggtcggctccatgctgtctgccggttctcttgatgtcagtggcaaa
aatatcgcggtcatcggcagcaatgtggtggcagacaaggatatcaacctgcgggcaaaa
gagaacctcaccgtcggcagcgcgcagcagagcgagagtgaatctcacctgtatgagcag
acaaaatccggcctgatgagcgccggcggcatgggtgtcatggccggcagcagcagcacc
aaagtcaccgatacgggcaaatccctctccaacgtcggcagcaccgtcggcagcgtactg
ggcaatgtcagcatgaccgccggtgaagacctgacggtgcaaggctccgacgtgttggcc
ggtaaagacattaatctgagcggtaagagcgtcagtattttggcggcggaaaatcacagc
agccagactcatagcgtcgagcaaaaaagcagcggcctgacactggcgctgtccggtgcg
gtcggcagcgctctcaataccgcggccaccaccgccaaagaggcccgcgacgaaagcaat
ggccgattagccgcgttgcaaggggtgaaagccgcactcagtggcgcgcaggcggtgcag
gccggccaactggtgcaggcgcaagggggcgatgccgccagcatggtcggtgtcagcgcc
tcattaggctcacaaaaatcgtcctcacagcagcatcaggaacagaccagcgtgaccggc
tcgaccctgacggcgggcaacaacctgacggtgacagccaccggcgaggggaacagcggc
gatattctggtgcaaggcagccagcttaaagccggcggtgataccaccttagatgccgcc
cgcgacttgctgttactcggtgccgccaacacgcagaaaaccgacggcagtaacagcagc
agcggcggcagcgtaggggtcagtctgggcctgaatggtgccagcagtggcctgagcatc
tttgccaacgccaacaagggccagggcaatgaacacggcaacggcaccacctggactgaa
accaccctcgacagcggcggcaccctgtcgctcaacagcggccgcgatacttcactcatc
ggcgcgcaggccagcggcgaaagcgtcaaggtggatgtcggccgcgacctgctgctgcaa
agccagcaagacagcgataattatgatgcgaagcagaccagcagcagcggcggtgtcagc
gtggcggtgaccggcggcggctcggccaacctgagcatgagtcaggacaaactgcacagc
aattatgactcggtgcaggaacagaccggcatctttgcgggcgctggcggctttgatatc
accgtcggcgagcatactcagctggatggcgcagtgattgccagcaccgcagaccagagt
aaaaatagtctggacaccggcacactgggcttcagtgatattgagaataaagccgatttc
aacgccgagcatcagggcggcagcctgagcagcggcggcccggtggggtctgacctgctg
agcaatctgggcggcgtggtgctgtcggggctgggtaatgacggtcatgccgggggcacc
acacaggcggcggtcagtgagggcaacatcaccctccgtgataccgataaacaacagcag
aatgtcgatgacctgagccgcgacaccgaccatgccaacggcagcatcggcccgatattt
gataaagagaaagagcaaaaccgcctcaaagaagcacagctgattggcgagataggcggt
caggcgatggatattgcgcggacgcagggggatattctcgggcttgaggaagcgttgaaa
cgccatcctgagctgaaaggcgatgcggatgccttacgcgaaacacccgaatacaaagcc
gaaatgcagaaatacggcaccggcagcgcactgcaacaggggcttcaggccgccaccgcc
gctattcaagggctggcgggcgggaatatggcgcaagcgctggcaggggcttccgcgccc
tatctggctgaagtgattcacaatatgacaaccgatgccaacggcaaggtcaacactgaa
gccaacctaatggcccatgcggtactgggtgcggtcgtggcgcagataaacggcaacagt
gcgctggcgggcgcttcgggtgcagcgatgggtgagtatatcgcccagcagatgtatcct
ggtatcaaacgtgaagacttgacagaagagcaacgacaaaccatcagcgcattgggtaca
ctggcggcaggattagccggtggattgaccggcgacagcaccgctgatacggttgccggt
gcacaggctgggaaaaatgcggttgagaataactccctgagtggtgacaaatcccgtgaa
acggttaaacaggccgcggaatccctgaaaaatcaggttagggataagcttggtgagggc
acaacctcttccattgcgaacggtattattaatgctcttgccgataccggcgatgcgacg
ttgggatcagtggattatgtagccgatgcagcgatggcactggcttcatgtgctgccgga
gacagttactgcactcaggcattaaacgatctggcgggtaaaaatcaagctgcagcagat
acgctgaaaaccctgatgaagagtgaaacctggacagcggttgcaggacaggtgaaagaa
gctgcacaaggtaaccagcttgcactggaagccacgggcggaatgctggcgggccttttc
ctgccgggtaagaaattacctgatgttgttaaacttattgattcaaacatcaaaattgta
acgggtgtaactgttggtactttcgaaaaaagtttagtcggacttcctccgggagagcgt
gtcgcgattataaaacaaacagccccgaaagttgcagcagaatacggcatggttaaagat
aatcagctaactaaaaataatgggcgcgatgtgtatcgaggacaagatggaaatctttat
gcacttgatacgcagcatggccgatttgaagttgtcagcccgaaaggtaaacatttaggt
gaagttgatttctctatgcaaaaaatacctaacagccaagataaatcgggttcccacaat
ttgaaggtgaaataa
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integrated database retrieval system
